Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5570 ATGGAGAAGAAAGCAGTAGCTGCCTTGTCCTTCCTCTTCCTCGTTCTCTTTGTTGCACAAGAAATAGCGGTGTGCGAGGCAAAAACTTGTGAGAATTTGTCTGGCACATTCAAGGGACCATGCATCCCAGATGGTAACTGCAACAAACATTGCAGGAACAACGAGCACTTACTGAGTGGGAGGTGCAGGGATGATTTTCGCTGCTGGTGCACTCGAAACTGTTAA 225 0.4756 MEKKAVAALSFLFLVLFVAQEIAVCEAKTCENLSGTFKGPCIPDGNCNKHCRNNEHLLSGRCRDDFRCWCTRNC* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5570 74 PANTHER DEFENSIN-LIKE PROTEIN 1 1 74 - -
Psa5g5570 74 ProSitePatterns Gamma-thionins family signature. 28 51 IPR008176 GO:0006952
Psa5g5570 74 Gene3D - 28 74 IPR036574 -
Psa5g5570 74 SUPERFAMILY Scorpion toxin-like 27 74 IPR036574 -
Psa5g5570 74 PANTHER DEFENSIN 1 74 - -
Psa5g5570 74 Pfam Gamma-thionin family 28 74 - -
Psa5g5570 74 SMART gth_4 29 74 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5570 Psa-Chr5 486715603 486716344 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5570 1 74 Plant Defensins Gene Families AT5G63660 48.000 3.70e-12 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5570 - - pvu:PHAVU_005G071400g 117.087