Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5532 ATGGCACAGTTACCTCCTAAAATACCAACCATACCCCAAAATTGGCAACATTTTTCTCACCAAAAGGTATCATCATCCTCCACAATGTCAAATATCACCTCTACAACCACCACCGATCATCAACAATTACCGTCATGGATCGACGAATTCCTCGACTTCTCCTCGGTAAGACGAGGAGCCCACCGGCGTTCTGCCAGCGACTCTATAGCCTTCCTCGAGACATCATTTCTCGAGGAAGACGGAAAAAGTGGTGGTGATGGAGAGGGTGACTTTGATAGACTGGATGATGAACAATTAATTTCCATGTTCTCTGACAATGTTGGCGGCGGTGTCTCGTTCCCGCCTCCATCAACCTCCAACCCGTCGTCACCGTCCTCCGACCAAAATAGCAACAACAATGAACAGAAACCAATGGCAATGGCGTTGGATTCTGCACCAGTTCAAGAACGTTTTCTTCATCATGAGGTGAAGCCTAAGGATGAAGCGGTTGAAGATGAAAGCTCGTGTAGAATTGAAGAAGCGGCGGCGGCGGCGCCATCTTTCGCCGCAACCATCACCTGCACTGAAACCGTTGTTGATCCCAAGAGGGTCAAAAGAATTTTGGCAAACCGGCAATCAGCTCAGAGGTCAAGAGTGAGAAAGCTGCAATACATTTCTGAGCTTGAAAGGAGTGTAACATCTTTGCAGACGGAGGTTTCAGCATTATCACCACGTGTAGCATTCTTGGACCATCAACGTTTGATTCTTAATGTCGACAACAGTGCCTTAAAGCAAAGAATTGCAGCATTGGCTCAGGATAAGCTTTTCAAAGATGCTCATCAAGAAGCATTAAAGAAGGAAATAGAAAGGTTGAGACAAATCTATCACCAACAAAACATACAAAAGATGGGAAATTCAATGAATAATAATAATAACAACAATGGTCATTCTCTTCCATCACTACCAACATCACAACCACACCAAGACTCTTTCCATAATCACTTGGAATGCAAAGACAAAGAGCAACTCCTTAGTTAA 1017 0.4435 MAQLPPKIPTIPQNWQHFSHQKVSSSSTMSNITSTTTTDHQQLPSWIDEFLDFSSVRRGAHRRSASDSIAFLETSFLEEDGKSGGDGEGDFDRLDDEQLISMFSDNVGGGVSFPPPSTSNPSSPSSDQNSNNNEQKPMAMALDSAPVQERFLHHEVKPKDEAVEDESSCRIEEAAAAAPSFAATITCTETVVDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDKLFKDAHQEALKKEIERLRQIYHQQNIQKMGNSMNNNNNNNGHSLPSLPTSQPHQDSFHNHLECKDKEQLLS* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5532 338 MobiDBLite consensus disorder prediction 1 40 - -
Psa5g5532 338 Coils Coil 274 294 - -
Psa5g5532 338 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 198 213 IPR004827 GO:0003700|GO:0006355
Psa5g5532 338 SUPERFAMILY Leucine zipper domain 195 249 IPR046347 GO:0003700|GO:0006355
Psa5g5532 338 PANTHER BASIC LEUCINE ZIPPER 34 1 306 - -
Psa5g5532 338 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 193 245 IPR004827 GO:0003700|GO:0006355
Psa5g5532 338 MobiDBLite consensus disorder prediction 9 40 - -
Psa5g5532 338 Pfam bZIP transcription factor 195 240 IPR004827 GO:0003700|GO:0006355
Psa5g5532 338 SMART brlzneu 191 255 IPR004827 GO:0003700|GO:0006355
Psa5g5532 338 Gene3D - 194 246 - -
Psa5g5532 338 CDD bZIP_plant_RF2 196 246 IPR044759 GO:0003700|GO:0006355
Psa5g5532 338 PANTHER BASIC LEUCINE ZIPPER 2 1 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5532 Psa-Chr5 479551646 479554579 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5532 1 273 bZIP Transcription Factor Family AT3G58120 53.425 2.16e-81 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa5g5532 bZIP_1 1.5e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5532 - - lja:Lj0g3v0133049.1 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5532 5 479551646 479554579 Psa5g5532 5 479551646 479554579 ECH