Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5515 ATGGGTCCTAAGAAATGGTTTAAGACAATACTCAGAAGGAAGAAACATAAGGAAGATAAACCCAAACAAGAAAAGGTACAATCTACTGGTGAAATATCAAATGAAACTTCTGATGGGAAGCTAAGCCCTCATGAAGAGTCGAGTAGTACTCCGAATGAAGGTTTGATGATGGACAGGACAGTTCCATCCAGGTTGATTGACGATATTGCTGCTACTAGGATTCAAAATGCATTTCGTTCATTTATGGCAAGAAGAACATTTCAACATCTAAGGGGAACAGAGAACTTTGAAGCTTTAATTCAAGATCACATGGCAAGAGAGCAAACATCAACTACACTGAACTATATACATTCATGGAGCAGAATACAGGATCAAATTCGCGCTCGCAGAATCTGTATGATAACAGCAGCCAGGATTAAGCAAAGGAGATTGGAAAGCCAGCTAAAACTTGAGGCTAAGATTAATGAGCTCGAGATGGACTGGTGCAGTGGTTCTGAAACAATGGAAGAGATAGTTTCCAGGATACATCAGCGAGAAGAAGCAGCAATTAAACGAGAGCGAGCCTTGGCATATGCTTTCTCGCATCAGTGGAGGCCAAACTGTAACCAGTATTTTGGCCAGGCTTCTTATAGCCTTAGTAAAGAAAGCTGGGGTTGGAGCTGGATGGAGCGTTGGGTTGCAGCGCGTCCTTGGGAAGTTCGGGTTCAAGTTCAGTCTCCTCAAACAAAGAAACTCAACGGCCAGCAACAGAAAACCAAAGTAGATAAGATGAACCACAATGAAACAAAACCACCATTGGCTAAAGCTTCCCTGTCAAACGGGAAGGAGACTGAGAAAGGAAAGAAAAACAAAGCATAA 858 0.4231 MGPKKWFKTILRRKKHKEDKPKQEKVQSTGEISNETSDGKLSPHEESSSTPNEGLMMDRTVPSRLIDDIAATRIQNAFRSFMARRTFQHLRGTENFEALIQDHMAREQTSTTLNYIHSWSRIQDQIRARRICMITAARIKQRRLESQLKLEAKINELEMDWCSGSETMEEIVSRIHQREEAAIKRERALAYAFSHQWRPNCNQYFGQASYSLSKESWGWSWMERWVAARPWEVRVQVQSPQTKKLNGQQQKTKVDKMNHNETKPPLAKASLSNGKETEKGKKNKA* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5515 285 MobiDBLite consensus disorder prediction 1 56 - -
Psa5g5515 285 MobiDBLite consensus disorder prediction 1 19 - -
Psa5g5515 285 MobiDBLite consensus disorder prediction 27 56 - -
Psa5g5515 285 PANTHER IQ-DOMAIN 10 1 283 - -
Psa5g5515 285 Gene3D - 4 96 - -
Psa5g5515 285 ProSiteProfiles IQ motif profile. 70 95 IPR000048 GO:0005515
Psa5g5515 285 MobiDBLite consensus disorder prediction 238 285 - -
Psa5g5515 285 MobiDBLite consensus disorder prediction 238 253 - -
Psa5g5515 285 PANTHER IQ-DOMAIN 5-RELATED 1 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5515 Psa-Chr5 477783533 477789508 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5515 30 237 IQD Protein Family AT3G15050 54.327 1.00e-79 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5515 - - mtr:MTR_2g078210 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5515 5 477783533 477789508 Psa5g5515 5 477783533 477789508 ECH