Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5472 ATGGCTTCTTCCACCAACATCCGTGAAAACTTCGTCTTTATTGCCAAGCTAGCAGAACAAGCTGAACGCTATGATGAAATGGTGGATGCAATGAAGAAGCTAGCGAAGATGGATGTTGAATTGAGTGTGGAAGAGAGAAACTTGTTTTCTGTTGGGTACAAGAATGTGGTGGGGTCAAGGAGAGCTTCATGGAGGATCCTATCATCAATTGAGCAGAAAGAGGAATCAAAAGGGAATGAATTGAATGTTAAGCGTATTAAGGGTTACAGACAGAAGGTGGAGGTGGAGCTTTCCGACATTTGCAATGACATTATGATTATTTTGGATGAGCATCTTATTCCTTCCACTAACATTGCTGAATCCACAGTGTTCTATTATAAGATGAAAGGAGATTATCATCGGTATTTAGCCGAATTCAAATCCGGTGATGAAAAGAAAGAGGTAGCAGATCAGTCACTTAAAGCATATCAGAGTGCTTCTGCGACTGCGGAGAATGAATTACAACCTACGCATCCTATCCGATTGGGTCTTGCTCTAAATTTCTCAGTGTTTTATTATGAGATAATGAATTCACCTGAAAGGGCCTGCCACCTTGCAAAACAAGCGTTTGACGACGGTGTCTCGGAGTTGGATAGCCTAAATGAAGATTCTTACAAGGACAGTACCTTGATCATGCAGCTGTTGCGAGACAACCTTACTTTATGGACTTCTGATATCCCAGAAGATAGTGAGGACCAGAAAATGGAAAGCGCGACTAAGAGTGGTCAAGAAGAAGAAGAATTGGGCCGCTAA 792 0.4192 MASSTNIRENFVFIAKLAEQAERYDEMVDAMKKLAKMDVELSVEERNLFSVGYKNVVGSRRASWRILSSIEQKEESKGNELNVKRIKGYRQKVEVELSDICNDIMIILDEHLIPSTNIAESTVFYYKMKGDYHRYLAEFKSGDEKKEVADQSLKAYQSASATAENELQPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDDGVSELDSLNEDSYKDSTLIMQLLRDNLTLWTSDIPEDSEDQKMESATKSGQEEEELGR* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5472 263 PANTHER 14-3-3 PROTEIN 4 263 IPR000308 -
Psa5g5472 263 MobiDBLite consensus disorder prediction 240 263 - -
Psa5g5472 263 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Psa5g5472 263 SMART 1433_4 8 249 IPR023410 -
Psa5g5472 263 MobiDBLite consensus disorder prediction 238 263 - -
Psa5g5472 263 PIRSF 14-3-3 2 249 IPR000308 -
Psa5g5472 263 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Psa5g5472 263 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Psa5g5472 263 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Psa5g5472 263 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Psa5g5472 263 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Psa5g5472 263 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Psa5g5472 263 Coils Coil 14 34 - -
Psa5g5472 263 Pfam 14-3-3 protein 15 236 IPR023410 -
Psa5g5472 263 Gene3D - 1 251 IPR036815 -
Psa5g5472 263 SUPERFAMILY 14-3-3 protein 8 238 IPR036815 -
Psa5g5472 263 PANTHER GENERAL REGULATORY FACTOR 2 4 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5472 Psa-Chr5 473924364 473929338 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5472 8 242 14-3-3 family AT1G26480 75.745 1.77e-139 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5472 K06630 - gmx:100806167 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5472 5 473924364 473929338 Psa5g5472 5 473924364 473929338 ECH