Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5463 ATGCACACAAACACAACAATGGAACCAAAAACTTCATATAGATTAGAAACCAAAAACTTATCATACAAATTGTGCAGCAAATTTGATGAACTTAGAAATCTTTGTTTTGGTTCGAATCCTAGGAGAGGTTCAAAGTTCATTTTGAAGGATGTAAACTGTGAAGCAAAGCCAGGGGAGATTACTGCTATTGCTGGTCCTAGTGGAGCTGGAAAAACTACACTGCTTGAGATTCTTGCTGGGAGAATACCAGCCTGTAAAGTTTCTGGACAAGTACTTGTCAATCACATGCCTATGGATGTGAACAGATTCAGACGAGAATCCGGGCACGTCGCGCAAGAAGATGCTTTGTTTCCGTTGCTTACGGTTAGGGAGACGCTCATGTATAGCGCTTTGTTGAGGCTTCCCGGCGCGCAAAAAGTGGCTGCTACTAGAGTTGCAGAGTTGATGAAGGAGCTCGGGTTGGACCCTATTGCAGATTCAAGAATCGGCAATGGATCAGGCCGTGGTATATCGGGCGGGGAGAGGCGTAGAGTTTCCATTGGTGTCGACTTAGTTCACGACCCTGCAATTATTTTGATTGATGAACCAACTTCAGGTCTGGATTCAGCATCAGCTCTTAATGTAATCTCGCTGCTTAGACTAATGGCATTTAATCAAGGTAAGACAGTTGTTTTAACTATCCACCAACCCGGTTTTCGAATCTTAGAGCAAATCGATAGCCTCATTTTGCTATCTGATGGATTTGTCACGCATAGTGGTTCACTGAATCTTCTTGAGGCAAGGCTCTGTTCATCCGGTCATCGCATTCCTAACCATGTCAATGTCCTAGAATTTGCTCTTGATGTCATGCAAACCTTGGTTATACATATTTCAGAATCAGGCCACAACCGGAACAATCAATTTCTTCTCAATGATGACAAAGAGCACCAAGATCAAAAGCAGCACTCTATGATTGTCAAAGAAAAGGCTATGCTGTACTCAAATTCTCCGATGGAGGAGATTTTGATCCTAGGACAAAGATTTTGCAGCAACATATTCAGAACCAAGCAACTCTTTGCTACAAGGGTCATCCAAGCCTTAGTAGCTGGATTTGTATTGGGGACCATATTCTTAAACGTTGGCAATGGCAACAAACAAAGTAAAATAGCATTACAAACGCGAAGCGGCTTCTTCGCTTTCAGCCTTACCTTTTTGCTATCATCAACAACAGAAGGTCTGCCTATTTTCTTAGAGGAGAGAGCAACATTCATGAGAGAGACCTCAAGAGGAGCTTATCGAGTTTCCTCATACGTTTTAGCAAATACGCTCGTGTTTCTTCCTTTTCTTCTAATGGTTGGTCTTCTTTACACTACTCCAGTTTACTGGCTGGTAGGATTACGAAAAGACATCGCCGGTTTCCTTTACTTCTCCTTAGTGGTTTGGTTGGTCCTATTAATGTCGAACTCTCTTGTCGCTTGTTTCAGCGCCCTAGTCCCGAATTTCATTCTCGGAAGCTCGTTGATTGCCGGTCTAATGGGGTCTTTCTTTCTATTCTCAGGGTATTTCATATCAAAGGAGAAAATACCTAGTTACTGGATTTTTATGCACTATATAAGTCTTTTCAAGTATCCATTTGAGTGCCTTATGATAAATGAGTATGGAGGCGAGCAAGGGAAAAAGAGATGCATAGAAGTAAACAACAATGGGGAATGCATATTATATGGAGTTGAGTTCTTAAGTCAACAAGGTCTGAAAGAGTCACAGAAATGGACCAATTTGGGCTTAATGTTAAGCTTCATAATAGGGTATAGAGTGCTTAACTTCATAATTCTTTGGTCGAGATGCTACAGAAGCAGAAAATAA 1842 0.4159 MHTNTTMEPKTSYRLETKNLSYKLCSKFDELRNLCFGSNPRRGSKFILKDVNCEAKPGEITAIAGPSGAGKTTLLEILAGRIPACKVSGQVLVNHMPMDVNRFRRESGHVAQEDALFPLLTVRETLMYSALLRLPGAQKVAATRVAELMKELGLDPIADSRIGNGSGRGISGGERRRVSIGVDLVHDPAIILIDEPTSGLDSASALNVISLLRLMAFNQGKTVVLTIHQPGFRILEQIDSLILLSDGFVTHSGSLNLLEARLCSSGHRIPNHVNVLEFALDVMQTLVIHISESGHNRNNQFLLNDDKEHQDQKQHSMIVKEKAMLYSNSPMEEILILGQRFCSNIFRTKQLFATRVIQALVAGFVLGTIFLNVGNGNKQSKIALQTRSGFFAFSLTFLLSSTTEGLPIFLEERATFMRETSRGAYRVSSYVLANTLVFLPFLLMVGLLYTTPVYWLVGLRKDIAGFLYFSLVVWLVLLMSNSLVACFSALVPNFILGSSLIAGLMGSFFLFSGYFISKEKIPSYWIFMHYISLFKYPFECLMINEYGGEQGKKRCIEVNNNGECILYGVEFLSQQGLKESQKWTNLGLMLSFIIGYRVLNFIILWSRCYRSRK* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5463 613 Pfam ABC-2 type transporter 333 546 IPR013525 GO:0016020|GO:0140359
Psa5g5463 613 SMART AAA_5 57 246 IPR003593 -
Psa5g5463 613 PANTHER ABC TRANSPORTER G FAMILY MEMBER 10 7 605 - -
Psa5g5463 613 ProSitePatterns ABC transporters family signature. 170 184 IPR017871 GO:0005524
Psa5g5463 613 Gene3D - 23 268 IPR027417 -
Psa5g5463 613 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 15 271 IPR003439 GO:0005524
Psa5g5463 613 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 7 605 - -
Psa5g5463 613 CDD ABCG_EPDR 14 253 - -
Psa5g5463 613 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 256 IPR027417 -
Psa5g5463 613 Pfam ABC transporter 48 198 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5463 Psa-Chr5 473215821 473217957 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5463 30 258 Calmodulin-binding Proteins AT2G36910 30.932 5.21e-15 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5463 K05681 - gmx:100776372 960.674