Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5459 ATGTCCCACCATGAAGACTACTTCAACACAAAATCAATGGCGGCTGAGAAAGATCCTCTCCACGTTTTAGCATCTCCTTGGGCTACCGCACTTGAACGATCCCTTCATTGGATCGCAGGGTGGAGACCCACCACAGCTTTTCACCTCATCTACACTGAATCATCTCTTCTCTTTGAGTCTCACATTATCGATATCCTTCGTGGCCTTAGGACCGGTGACCTCGGCGATCTCTCCCCGACTCAGTTCCGTCGTCTTAGCGACTTGCAATGTGACACCGTGAAGGAAGAGAATGCAATAACGGAGGAGTTATCAAAATGGCAAGACAGTGCGAGCGATATGATGGGTTCCGAGGCTGAAATCAATGACAAGATCCAACGGCTGGTTAGCATTATAAAGAAAGCGGATGATCTACGGCTGAAAACGTTGCGGAGTGTGGTGGATTTTCTGTCGCCGCAGCAGGCTATCGAGTTCTTGATTGCCTCAGCTGAGTTGCTGGTTGGGATACGCGGTTGGGGATTGAATCACGACCGTTCACTTCCTAGGATATGA 549 0.4936 MSHHEDYFNTKSMAAEKDPLHVLASPWATALERSLHWIAGWRPTTAFHLIYTESSLLFESHIIDILRGLRTGDLGDLSPTQFRRLSDLQCDTVKEENAITEELSKWQDSASDMMGSEAEINDKIQRLVSIIKKADDLRLKTLRSVVDFLSPQQAIEFLIASAELLVGIRGWGLNHDRSLPRI* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5459 182 PANTHER DNA-BINDING PROTEIN-LIKE PROTEIN 1 178 - -
Psa5g5459 182 PANTHER - 1 178 - -
Psa5g5459 182 Pfam Seed dormancy control 1 52 IPR025422 GO:0006351|GO:0043565
Psa5g5459 182 ProSiteProfiles DOG1 domain profile. 1 178 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5459 Psa-Chr5 472800603 472801492 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5459 1 160 bZIP Transcription Factor Family AT5G06950 25.424 1.27e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5459 - - gmx:778192 297.36