Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5433 ATGGAGAATCTTGGTTGGTTTCCTACAAATGGAAAAAGGGCAATGGAAGAAGAGCTTATTAGAGGACGTGACATGGCAAATCAATTACTAGAAGTACTTACTTTTGAAGATAAGTCTAATATTATTAAACAAATCAAAGGGTCAAACTCAAGATCATCAAAAGTGTTACCTAAAGATGTTGCTCAAGATCTTGTTCGAGAGGTACTTAAATCATTGACAAATACACTTTTGTTATTGAACAAGAGAGAAGACTCTAGTGATGTTCCTATAACAGTTAGAGAATTTTCTTTCTCAACCAATTGCCACAAGATGGAGGAGGATCTGGATGAAGCTTGCGAACAACTAAAAACTCTCAACACAGAAAGTCCAAAAGGAACGAAAAAGAGAAAGTTATCTGTACCGACTTGGGAAAAAACCACCTCAATATTGATTGATGATGGTCATACATGGAGAAAATATGGACAAAAAACAATAGCAAATTCCAAATTCGTCAGGAGTTACTATAGGTGTACACACAGCGATCAACATTGTGAAGCAATGAAACATGTTCAAAGAATTCAAGAGAATCCTCCATTGTATAAGACTACGTGTTATGGCTATCACACTTGCAAAAACTATTTTCAATCAAATATAATTTTTGAACCCGTTTCGTCATCAGACTCTTCTATAATACTTAGTTTTGATAATAACATTCCAAGTAAACAAGAAGATATGTTATGGTCATCGCCACCATTGCCACCACTATCACCGGTTCGCGTCTCTTCGGAAGGGAATCATGTGGAAGTAATGCATGTTGATCATTTTTCTCAAAATCAATTTTTTCTTTCGGAGAATCTCCAATTATGGGAATCTGATGTTTATTTAAACCTTTTGAGGGACGTTAATGTGTTACCACCATTGAGTGAAAACTTAGGTATTCTTAAATAG 927 0.3517 MENLGWFPTNGKRAMEEELIRGRDMANQLLEVLTFEDKSNIIKQIKGSNSRSSKVLPKDVAQDLVREVLKSLTNTLLLLNKREDSSDVPITVREFSFSTNCHKMEEDLDEACEQLKTLNTESPKGTKKRKLSVPTWEKTTSILIDDGHTWRKYGQKTIANSKFVRSYYRCTHSDQHCEAMKHVQRIQENPPLYKTTCYGYHTCKNYFQSNIIFEPVSSSDSSIILSFDNNIPSKQEDMLWSSPPLPPLSPVRVSSEGNHVEVMHVDHFSQNQFFLSENLQLWESDVYLNLLRDVNVLPPLSENLGILK* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5433 308 ProSiteProfiles WRKY domain profile. 139 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa5g5433 308 Pfam WRKY DNA -binding domain 145 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa5g5433 308 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 7 297 IPR044810 GO:0003700
Psa5g5433 308 Gene3D WRKY domain 131 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa5g5433 308 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 7 297 - -
Psa5g5433 308 SMART WRKY_cls 144 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa5g5433 308 SUPERFAMILY WRKY DNA-binding domain 139 204 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa5g5433 308 Coils Coil 101 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5433 Psa-Chr5 471128817 471134141 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5433 127 236 WRKY Transcription Factor Family AT5G22570 40.000 1.26e-21 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa5g5433 WRKY 5.1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5433 - - gmx:100792193 252.677