Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5432 ATGGAAAATGTTGTTTGGCTTTCTACAAATGGCAAAAAGGCAATAGAAGAAGAGCTTATAAGAGGACATGATATGGCAAATCAATTACTTGAAGTACTAACTTTTGATGATAAGTCAAATATTAGTATTAGGGAAGTCAAAGGGTCAAACTCAAAATCATTATCAACCTTAATAGCCGGAGATCTTGTTCGACAGATACTCAAATCATTGACAAATGCTGTTTTGCTTTTGAGCAACAATCAAGACTCCAATGATGTTCCTTTAATTGTTAGAGATGTTTCTTTCTCAAATAATTGCCACAAGATGGAGGTTGATTTGGATGGAGCATACAAGAAACTCAACACCCTCAACACCAAACAACAAAAAGGGTCGAGCAAGAGAAAGTCAATTTCAGCAACTTGGGAAAAGACCACTCCAATATTGATTGATGATGGTCATACATGGAGAAAGTATGGACAAAAAAGGATAACAAAAGCCAAATACTATAGAAGCTACTATAGATGCACACACATGAACGATCAACACTGTGAAGCAATGAAACATGTTCAAAGAACTCAAGAGAATCCTCCATTGTACACTACTACATATTATGGTTATCACACTTGCAAAAGCAATTTGGAACCAATTTTGTCCTCTGATGACTCTTCTGTACTGCTTAGTTTCGATAACAACGTTCTAGTTAAACAAGAATACCAGCTTCCACCACCTTTGCCATTGCCATTGCCACCACTTGTTGCTTCAATAAAAGAGGATCCCTTGAAAGAGATTCATCCGAATCAATTGTTCTTATCAGAGAACATCCTGTCATGTAACTTTGAAGTTTATTTCGATAATGTGAAACATACCACTATGCTGTTATCTCCTGAATCATTTGAATTTGAGAATGTTTATGATCAGTTTGGATTTTGA 909 0.3575 MENVVWLSTNGKKAIEEELIRGHDMANQLLEVLTFDDKSNISIREVKGSNSKSLSTLIAGDLVRQILKSLTNAVLLLSNNQDSNDVPLIVRDVSFSNNCHKMEVDLDGAYKKLNTLNTKQQKGSSKRKSISATWEKTTPILIDDGHTWRKYGQKRITKAKYYRSYYRCTHMNDQHCEAMKHVQRTQENPPLYTTTYYGYHTCKSNLEPILSSDDSSVLLSFDNNVLVKQEYQLPPPLPLPLPPLVASIKEDPLKEIHPNQLFLSENILSCNFEVYFDNVKHTTMLLSPESFEFENVYDQFGF* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5432 302 SUPERFAMILY WRKY DNA-binding domain 138 203 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa5g5432 302 Gene3D WRKY domain 124 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa5g5432 302 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 5 295 IPR044810 GO:0003700
Psa5g5432 302 ProSiteProfiles WRKY domain profile. 137 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa5g5432 302 SMART WRKY_cls 142 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa5g5432 302 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 5 295 - -
Psa5g5432 302 Pfam WRKY DNA -binding domain 143 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5432 Psa-Chr5 471066927 471069961 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5432 12 203 WRKY Transcription Factor Family AT5G01900 35.417 2.41e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa5g5432 WRKY 3.9e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5432 - - gmx:100792193 267.7