Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5405 ATGACGTCAGGGACGAGGCTGCCAACATGGAAGGAGAGAGAAAACAACAAGAGGAGAGAGAGAAGAAGAAGAGCTATAGCTGCAAAGATCTTCTCTGGTTTGAGAATGTATGGTAACTTCAGATTACCAAAACATTGTGATAACAATGAAGTTCTTAAAGCTCTTTGTAATGAAGCTGGTTGGACTGTTGAACCCGATGGAACCACTTATCGTAAGGGATGCAAACCTTTAGAGCATATGGATATAATTGGTGGTTCATCGGCTGCAAGCCCTTGCTCATCTTACCATCCAAGCCCGGGCTCATCGTCCTTCCCAAGTCCATCTTCGTCTCCTTACGCAGCAAATCGTAACACCGATGGTAATTCCCTCATTCCGTGGCTCAAAAACCTCTCCACAGCTTCATCTTCAGCATCATCCCCGAAACTTCCACATCCCTACCTTCACAGCGGCTCCATCAGCGCGCCTGTCACACCTCCCCTAAGCTCTCCAACTTCCAGAACACCGCAAATGAATACTAATGACTGGGAAGAACGATCTGCACGGCCGGGATGGACCGGGCAGCATTACTCTTTCCTGCCTTCTTCAGGTCCTCCAAGCCCCGGCCGTCAGATAGTCGATCCTGAATGGTTTGCAGGGATCAAACTTCCTCATGCTAGTCCAACTTCCCCAACCTTCAACCTTGTCTCTCGAAATCCATTTGCTTTCAAGGAAGATGGCTTTTCGGGGAGCGGTTCGCGTATGTGGACCCCTGGACAGAGTGGAACGTGTTCTCCGGCTATTGCAGCTGGCTCGGATTACACTGCTGACATTCCTATGTCAGAAGCAATCTCAGATGAATTTGCATTTGGAAGCAACACATTTGGGATTGTGAAGCCTTGGGAAGGAGAAAGGATCCATGAAGAATTTCTAACCGATGATCTTGAACTTACACTTGGTAACTCAAAGACCAGGTGA 954 0.4811 MTSGTRLPTWKERENNKRRERRRRAIAAKIFSGLRMYGNFRLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPLEHMDIIGGSSAASPCSSYHPSPGSSSFPSPSSSPYAANRNTDGNSLIPWLKNLSTASSSASSPKLPHPYLHSGSISAPVTPPLSSPTSRTPQMNTNDWEERSARPGWTGQHYSFLPSSGPPSPGRQIVDPEWFAGIKLPHASPTSPTFNLVSRNPFAFKEDGFSGSGSRMWTPGQSGTCSPAIAAGSDYTADIPMSEAISDEFAFGSNTFGIVKPWEGERIHEEFLTDDLELTLGNSKTR* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5405 317 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 1 317 - -
Psa5g5405 317 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 131 IPR008540 -
Psa5g5405 317 MobiDBLite consensus disorder prediction 1 21 - -
Psa5g5405 317 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 317 IPR033264 GO:0003700|GO:0006351|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5405 Psa-Chr5 470031945 470035514 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5405 1 317 BZR Transcription Factor Family AT1G78700 67.463 1.94e-125 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Psa5g5405 BES1_N 3.6e-57 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5405 - - mtr:MTR_2g075400 509.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5405 5 470031945 470035514 Psa5g5405 5 470031945 470035514 ECH