Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5397 ATGTATGATTCTTATCCTGTGTGGTTTTTCACTACTGATTGGATCCGTGCAGGCTCGCTTCATAACATGCCCTTCGAACCTTGGTCTTCATCGATTCTATTCGATTCAGTTTCGTTTTTGAGGAAAATTGAGAGAAAACAAGAGTTTCAATCAGTAACAACAAGAAACAAAGAAGAAATGATTTGTTACGTGAATCTCGTCTTCCTTGTGTTCTCAGCAACTTTGATTTCTTACGGCTTCGCATTCACCAATCCATTTGACGTTACAGCCCTCCAGGATCTATACAGGAGCTTAAACAACCTCAAGGGCTACACGGATGGAACGGTGGTGATCTTCAAAATTCAAGGATTGAACCTTACCGGATATCTTGGATCCTCGCTGTATAATCTACAAAATTTGAGATATTTGATATCAGTTCCCAACAGCATAATGGGTGAAATACCATACGAATTACCTCCAAATGCCACACATATGAATTTAAGCCACAATTTCTTGTATGGACCAATTGGCAATGTGTTCACTGGCTAG 528 0.3977 MYDSYPVWFFTTDWIRAGSLHNMPFEPWSSSILFDSVSFLRKIERKQEFQSVTTRNKEEMICYVNLVFLVFSATLISYGFAFTNPFDVTALQDLYRSLNNLKGYTDGTVVIFKIQGLNLTGYLGSSLYNLQNLRYLISVPNSIMGEIPYELPPNATHMNLSHNFLYGPIGNVFTG* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5397 175 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 2 ISOFORM X1 107 170 - -
Psa5g5397 175 SUPERFAMILY L domain-like 64 169 - -
Psa5g5397 175 Gene3D Ribonuclease Inhibitor 87 174 IPR032675 -
Psa5g5397 175 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 107 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5397 Psa-Chr5 469566248 469568109 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5397 66 175 Strubbelig Receptor Gene Family AT5G06820 33.766 1.39e-17 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5397 - - cam:101498175 142.124