Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5387 ATGACGTCGGGGACGAGACAACCAACGTGGAAGGAGAGAGAGAATAACAAAAGGAGAGAGAGAAGAAGAAGAGCCATAGCTGCGAAGATCTTCTCCGGTTTGAGAATGTACGGTAACTACAAGCTTCCCAAACACTGCGACAACAATGAAGTTCTCAAAGCTCTCTGTAATGAAGCCGGTTGGATCGTTGAACCGGATGGCACAACGTATCGTAAGGGATGCAAGCCTATGGAGCGAATGGATGTGGTAGGTGGTTCTGCAATGGGAAGCCCATGTTCATCTTACCACCCAAGTCCCTGTGCTTCCTACAACCCAAGCCCTGGCTCTTCTTCCTTCCCTAGTCCACGCTCATCCTCCCATGCTGTAAATCCTAATGGTGACGCCAATTCCCTAATTCCATGGCTCAAAAACCTCTCATCTGGATCATCATCAGCATCCTCTTCCAAGCTTCCGCAGCTATATGTTCATACTGGTTCCATCAGTGCTCCTGTGACTCCTCCACTTAGCTCTCCAACTGCCCGATCATCTCAGACGAAAGCTGACATCTGGGAGGATCAGTCCACTCGTCCTGGCTGGGGCGGGCAGCAGTACTCCTTCCTGCCTTCCTCCACTCCTCCAAGCCCAGGTCGCCAAGTTCTTGACCCAGATTGGTTTGCTGGGATTAGGATGCCCCAGGGTGGGCCAACTTCTCCTACATTTAGCCTAGTGGCTTCTAATCCATTTGGCTTCAGGGAAGAGGTTTTCTGTGGCAGCGATTCCCGCATGTGGACACCTGGACAAAGTGGGACATGTTCTCCAGCTATAGCTGCAGGCTCTGATCATACTGCTGACATACCAATGGCTGAAGCTGTTTCAGATGAATTTGCCTTTGGAAGCAGTGCCGCTGGTTTGGTGAAGCCTTGGGAAGGAGAGAGAATCCATGAAGATTCCGGCTCAGATGATTTAGAGCTCACTCTTGGTAGCTCAAAGACCAGGTAA 978 0.5072 MTSGTRQPTWKERENNKRRERRRRAIAAKIFSGLRMYGNYKLPKHCDNNEVLKALCNEAGWIVEPDGTTYRKGCKPMERMDVVGGSAMGSPCSSYHPSPCASYNPSPGSSSFPSPRSSSHAVNPNGDANSLIPWLKNLSSGSSSASSSKLPQLYVHTGSISAPVTPPLSSPTARSSQTKADIWEDQSTRPGWGGQQYSFLPSSTPPSPGRQVLDPDWFAGIRMPQGGPTSPTFSLVASNPFGFREEVFCGSDSRMWTPGQSGTCSPAIAAGSDHTADIPMAEAVSDEFAFGSSAAGLVKPWEGERIHEDSGSDDLELTLGSSKTR* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5387 325 MobiDBLite consensus disorder prediction 303 325 - -
Psa5g5387 325 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 325 IPR033264 GO:0003700|GO:0006351|GO:0009742
Psa5g5387 325 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 139 IPR008540 -
Psa5g5387 325 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 1 325 - -
Psa5g5387 325 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5387 Psa-Chr5 468815672 468820833 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5387 1 325 BZR Transcription Factor Family AT1G78700 70.149 2.29e-135 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Psa5g5387 BES1_N 2.3e-66 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5387 - - zju:107432618 528.094