Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5383 ATGGTGGATTCTGAGCTCTACATGAAAGCACGTGTTTCTCCTATTTCATTGACTTATTATGGCTTTTGCCTCGCAAATGGAAACTACACCGTAAATCTGCATTTTGCTGAAATAATGTTCACAGATGGTCAAACTTATGGTAGTCTTGGAAGGCGTGTATTTGATATCTATCTTCAGGGAAATGCAGTGCAAAAGGACTTCAATATTGCCAAAGAAGCAGGAGGAGTTGGTAAGAAAATCATAAAACAGTTCAATGATGTTGTTGTTACCAGTAATACTTTGGAGATCCGTTTGTATTGGGCTGGAAAAGGGACACAGTATCTCCCAAATAAATCAGTATACGGTCCTCTTATATCAGCTATATCAGTGAAATCTGACTCTCCACCTAGAAGCATATCTGCAGGAGCTGTGGTTGGAATTGTGGTTGCAGCAACAATTATTATCATTCTAGTATTCGGTATACTCTGGTGGAAAGGATGTTTTGGAAAGAAAAACTCTTTAGCAAAAGAGCTGAAGAGTTTAGACCTTCAAACGAGTTTATTTACCTTAAGACAAATCAAATCAGCAACAAATAACTTTGATATTTCCAATAAGATTGGAGAAGGAGGATTCGGTCCTGTGTACAAGGGCAGTTTGCCCAATGGGACATTGATAGCAGTCAAACAACTTTCTTCTAAATCAAAGCAAGGGAATCGTGAGTTTTTAAATGAGATAGGCATGATTTCTGCTTTGCAACACCCTCATCTTGTTAAACTCCATGGCTGTTGTGTGGAGGGAGATCAGTTATTGCTGATATATGAATACTTGGAAAACAATAGTCTTGCTCGTGCTTTATTTGGTCCAGAGGAACACCAAATAAAACTAGATTGGTCAACAAGGAAGAAGATCTGCGTTGGTATTGCTAGAGGTTTGGCATACCTCCATGAAGAATCAAGATTGAAGGTTGTTCACAGGGACATCAAAGCCACTAATGTGTTGCTTGATAAAGATCTCAAACCAAAGATATCTGATTTTGGTTTAGCCAAGCTTGATGAGGAGGACAATACTCATATCAGCACTAGAATTGCGGGGACCTATGGATATATGGCTCCTGAATATGCATTGCATGGGTATTTGACAGACAAAGCAGATGTCTATAGTTTTGGAGTTGTTGCCTTGGAAATCGTTAGTGGAAGGAGCAACACCCTTTATCGGTCCAAGGAGGAAGCATTCTATCTTCTTGATTGGGCACATTTGATGAAAGAGAAGGGTGACTTAATGGAGCTAGTTGATAGAAGATTAGGATCAGATTTGAACAAAAAAGAAGCTATGGTGGCGATCAATGTGGCTCTCCTATGCACGAATGTGACTTCAAACCTTAGGCCGTCCATGTCATCGGTGGTAAGTATGCTCAAAGGTAGGAGCGCGGTTCCAGAATTCGTTGCAGATTCAAGTGAAGTAATAGATGAAAAGAAGTTTGAAGTAATGAGGAAGTATTACTATCAGATTGAAGAAAATAAGATAAGTAGTAAGTCAGAAACACAAACACAGAGTCAGAGTTTATTAAGCGATGGGCCATGGACTGCTGCATCTTCCTCAGCTGTAGACCTTTATCCAGTCCATCTTGATTCTTCCTATTGGGAGGAAAGAAATTAA 1635 0.3957 MVDSELYMKARVSPISLTYYGFCLANGNYTVNLHFAEIMFTDGQTYGSLGRRVFDIYLQGNAVQKDFNIAKEAGGVGKKIIKQFNDVVVTSNTLEIRLYWAGKGTQYLPNKSVYGPLISAISVKSDSPPRSISAGAVVGIVVAATIIIILVFGILWWKGCFGKKNSLAKELKSLDLQTSLFTLRQIKSATNNFDISNKIGEGGFGPVYKGSLPNGTLIAVKQLSSKSKQGNREFLNEIGMISALQHPHLVKLHGCCVEGDQLLLIYEYLENNSLARALFGPEEHQIKLDWSTRKKICVGIARGLAYLHEESRLKVVHRDIKATNVLLDKDLKPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYALHGYLTDKADVYSFGVVALEIVSGRSNTLYRSKEEAFYLLDWAHLMKEKGDLMELVDRRLGSDLNKKEAMVAINVALLCTNVTSNLRPSMSSVVSMLKGRSAVPEFVADSSEVIDEKKFEVMRKYYYQIEENKISSKSETQTQSQSLLSDGPWTAASSSAVDLYPVHLDSSYWEERN* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5383 544 ProSiteProfiles Protein kinase domain profile. 193 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g5383 544 SMART serkin_6 193 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g5383 544 Gene3D Transferase(Phosphotransferase) domain 1 269 477 - -
Psa5g5383 544 Gene3D Phosphorylase Kinase; domain 1 160 268 - -
Psa5g5383 544 Pfam Malectin domain 2 121 IPR021720 -
Psa5g5383 544 SUPERFAMILY Protein kinase-like (PK-like) 176 472 IPR011009 -
Psa5g5383 544 Gene3D - 1 127 - -
Psa5g5383 544 CDD STKc_IRAK 199 466 - -
Psa5g5383 544 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 3 511 - -
Psa5g5383 544 ProSitePatterns Serine/Threonine protein kinases active-site signature. 315 327 IPR008271 GO:0004672|GO:0006468
Psa5g5383 544 Pfam Protein tyrosine and serine/threonine kinase 195 463 IPR001245 GO:0004672|GO:0006468
Psa5g5383 544 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 3 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5383 Psa-Chr5 468517934 468521452 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5383 1 523 Receptor kinase-like Gene Family AT1G53420 62.335 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa5g5383 PK_Tyr_Ser-Thr 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5383 - - cam:101501658 812.757