Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5381 TTGGGAAAATTGGAGTATTTTCTTGGCATAGAAGTTACTCATTTGGCTAATGGTTCACTCTTTCTTTCTCAAGCTAAATACTTAACTGATTTGCTTGCTAAGGTTAACATGCTCAATGCAAATAGTATGCCTACTCCTATGTTGGGAAAATTGGAGTATTTTCTTGGCATAGAAGTTACTCATTTGGCTAATGGTTCACTCTTTCTTTCTCAAGCTAAATACTTAACTGATTTGCTTGCTAAGGTTAACATGCTCAATGCAAATAGTATGCCTACTCCTATGGTATCTACAAACTTGAAGAGTTTAGACGTTCAAACGGGTATATTTACCTTACGACAAATCAAAGCAGCTACAAATAACTTTGATATTTCCAATAAGATTGGAGAAGGAGGATTTGGTCCTGTTTACAAGGGATGTTTACCCAATGGGACATTGATAGCAGTAAAGCAACTTTCTTCTAAATCAAAGCAAGGGAATCGTGAGTTTTTAAATGAGATAGGCATGATTTCTGCTTTGCAACACCCTTATCTCGTTAAACTCCATGGCTGCTGTGTGGAGGGAGATCAGTTGTTGCTGGTATATGAATACTTGGAAAACAATAGTTTAGCTCGTGCTTTATTTGGTCCAGAGGAACACCAAATTAAATTAGATTGGCCAACAAGGCAGAAGATTTGTGTTGGTATTGCTAGAGGTTTGGCATACCTCCATGAAGAATCAAGACTGAAGGTTGTTCACAGGGACATCAAGGCCACTAATGTATTGCTTGATACCAATCTTGACCCAAAGATATCTGATTTTGGTTTGGCCAAGCTTGATGAGGAGGACAATACTCACATTAGTACTAGAATTGCCGGGACCTATGGATACATGGCTCCTGAATATGCAATGCATGGTTATTTGACTGACAAAGCAGATGTTTATAGTTTTGGAATTGTTGCCTTGGAAGTCGTTAGTGGAAGGAACAACACCCTTCATCGGACAAAGGAGGAAGCATTCTATCTTCTTGATTGGGCACATTTGTTGAAAGAGAGGGGTGACCTAATGGAGCTAGTTGATAGAAGATTAGGTTCAGATTTCAACAAAAAAGAAGCTATGGCGGTAGTCAATGTGGCTCTTCTATGCACGAATGTCACTTCAAACCTTAGGCCGTCCATGTCGTCGGTGGTGAGTTTCCTTGAAGGGAGGAATGCGGTTCCAGAATTTGTTTCAGATTCAAGTGAAGTAATGGATGAAAAGAAGTTGGAAGTAATGAGGAAGTATTACTATCAGATAGAAGAAAATAAGATAAGCAATACGTCAGAAACACAAAGTCAGAGTTTATTTAGTGATGGGCCATGGACTGCTTCATCTTCATCAGCGGTAGACCTTTATCCTCTCCACGTTGATTCTTCCTATTTGAAGGAAAGAAATTAA 1413 0.39 LGKLEYFLGIEVTHLANGSLFLSQAKYLTDLLAKVNMLNANSMPTPMLGKLEYFLGIEVTHLANGSLFLSQAKYLTDLLAKVNMLNANSMPTPMVSTNLKSLDVQTGIFTLRQIKAATNNFDISNKIGEGGFGPVYKGCLPNGTLIAVKQLSSKSKQGNREFLNEIGMISALQHPYLVKLHGCCVEGDQLLLVYEYLENNSLARALFGPEEHQIKLDWPTRQKICVGIARGLAYLHEESRLKVVHRDIKATNVLLDTNLDPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEVVSGRNNTLHRTKEEAFYLLDWAHLLKERGDLMELVDRRLGSDFNKKEAMAVVNVALLCTNVTSNLRPSMSSVVSFLEGRNAVPEFVSDSSEVMDEKKLEVMRKYYYQIEENKISNTSETQSQSLFSDGPWTASSSSAVDLYPLHVDSSYLKERN* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5381 470 ProSiteProfiles Protein kinase domain profile. 121 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g5381 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Psa5g5381 470 Gene3D Transferase(Phosphotransferase) domain 1 197 407 - -
Psa5g5381 470 CDD STKc_IRAK 127 394 - -
Psa5g5381 470 Gene3D Phosphorylase Kinase; domain 1 83 196 - -
Psa5g5381 470 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 76 435 - -
Psa5g5381 470 SUPERFAMILY Protein kinase-like (PK-like) 104 404 IPR011009 -
Psa5g5381 470 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 76 435 - -
Psa5g5381 470 Pfam Protein tyrosine and serine/threonine kinase 123 392 IPR001245 GO:0004672|GO:0006468
Psa5g5381 470 SMART serkin_6 121 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5381 Psa-Chr5 468475161 468479153 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5381 99 452 Receptor kinase-like Gene Family AT1G53430 67.218 1.53e-164 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa5g5381 PK_Tyr_Ser-Thr 8.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5381 - - gmx:100785451 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5381 5 468475161 468479153 Psa5g5381 5 468475161 468479153 ECH