Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5370 ATGGATAACTATTTGTCCCAATTGAGTCCAGAAATGTATGTTGCAACCACAATGCTCTCCCTCGTAGTAGTATACATTACTATGAACTTTCTTTCAATCCAAAGTAGAACCAAAAGCCAAAAATATATTCTCCCACCAGGTCCATCACCACTTGCAATCATGTTACATGTTTTTGAGCTTCGAAAAAATCCACAATATTGTCTAGCAAAATTCTCCACCTTACATGGTCCAATAATGCACTTAAAGCTAGGGCAAATATCGACCGTAGTTATATCTTCGGCCGATGCAGCCCAAGAAGTGCTTCAAACTCATGACCTTTTATTCTCAAACCGAACGGTTCCTCAAGCTGTCGCGGTCCTCGATCACGATATTTTTAGCTTACCCTTTATGCCGGTTTGCGATCTTTGGAGAGACCTAAGAAAAATATGCAAAAATGAGTTGTTTTCTAGCCAAACACTTGATGCTAGCCATGCACTTAGGTGTAAGAAGTTACAAGAGATTTTAAGTGAGATTGATAGAAGTAGCTTAGTTGGTGAAGCTGTTGATGTTGGAAGAGCTGCTTTTAAGACTACAATGAATTTTTTATCAAACACTTTTTTTTCAAAGGACTTTGCTAACTCTGCAGGTGAAACTGATGAGTATAAGAGTATTATTGAAAATCTTGTGAGTGCAATAGGAACACCAAATTTGGTTGATTTTTTTCCGGTTTTGAAAATGGTTGATCCACAAGGTATAAGAGGAGTTTCAGCTACTTATCTTGATAAGTTGTTGCAAATAATCGATTCTTATATTATCAAGAGAATGGAGTTAAGAGGAGGAGAAAATTATGTCAAATATAATGACATGTTGGATAATTTGCTCGATATCTCTCAACAGAATGGCCAAAAGATGGACAACACCAAGATAAAACATTTGTTTCTTGATTTATTCGTTGCGGGGACAGATACAACTTCCTACACAATAGAAAAAGCAATGACAGAATTAATCCACAATCCACATGCGATGATAAAGGCCAAAGAAGAGCTTGCACAAATAATCGGCATAGGAAAAACAATTCAAGAATCCGACATTGTCAATCTTCCATATTTGCAAGCAATAGTAAAAGAAACATTACGTTTGCATCCATCCGCTCCGCTTTTACTACCAAGAAAAGCCAAAATCGACGTACAAATTCATGGATACACAATTCCACAAGGTGCGCAAGTCTTGATTAACAAATGGGCCATGGCGAGAGACCCAAAAATTTGGAATGAAGCAAACTCGTTTTTGCCCGAAAGATTTTTGGGCTCTGAAATAAATTATCGAGGTCAAAACTTTCAATTGACGCCATTTGGGAGCGGAAGAAGAATATGTCCGGGCATGCCACTTGCTATTAGGATGTTGCATACGATGTTGGGATCAATGATTAACTTCTTTGATTGGAAACTTGAAAATGGAGTTAAAGATATTGATCAACACTTGAGAGCTATTCCCTCTAGAGTGAACAAGGTGGAACATACAATATGA 1506 0.3752 MDNYLSQLSPEMYVATTMLSLVVVYITMNFLSIQSRTKSQKYILPPGPSPLAIMLHVFELRKNPQYCLAKFSTLHGPIMHLKLGQISTVVISSADAAQEVLQTHDLLFSNRTVPQAVAVLDHDIFSLPFMPVCDLWRDLRKICKNELFSSQTLDASHALRCKKLQEILSEIDRSSLVGEAVDVGRAAFKTTMNFLSNTFFSKDFANSAGETDEYKSIIENLVSAIGTPNLVDFFPVLKMVDPQGIRGVSATYLDKLLQIIDSYIIKRMELRGGENYVKYNDMLDNLLDISQQNGQKMDNTKIKHLFLDLFVAGTDTTSYTIEKAMTELIHNPHAMIKAKEELAQIIGIGKTIQESDIVNLPYLQAIVKETLRLHPSAPLLLPRKAKIDVQIHGYTIPQGAQVLINKWAMARDPKIWNEANSFLPERFLGSEINYRGQNFQLTPFGSGRRICPGMPLAIRMLHTMLGSMINFFDWKLENGVKDIDQHLRAIPSRVNKVEHTI* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5370 501 Pfam Cytochrome P450 45 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g5370 501 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 16 483 - -
Psa5g5370 501 SUPERFAMILY Cytochrome P450 45 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g5370 501 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g5370 501 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g5370 501 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g5370 501 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g5370 501 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g5370 501 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g5370 501 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g5370 501 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g5370 501 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g5370 501 Gene3D Cytochrome P450 34 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g5370 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Psa5g5370 501 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 16 483 - -
Psa5g5370 501 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g5370 501 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g5370 501 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g5370 501 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5370 Psa-Chr5 467847549 467850368 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5370 14 484 Cytochrome P450 AT2G45550 40.664 1.00e-137 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5370 - - gmx:100792017 601.282