Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5369 ATGAATACATCTACGTATACATGTGAGATAGTGGAATCAAGGGAAGAGATATTACCCGAGTTTGATACCGATGAAAAACCCGAGAGTAGTTGTTCGTATCGATTAGGAAAAAGGTACTCGATTGAGGATGACATCGATCGTCTTTTCCAGGCTATTGAGATTCATAAAGGTTCGTCTAGAGGTCATAGTATGTCACGGTCGCAAAAGAGTGCTCTTAAAAGACCGATTAAAGTTTGTTCGTCTCAGGTGTCGGGAATTGGAATTGCGGAGCGTGTAAGTTTGAAGCAGGCGCTTCGAGGATTGTGTATCTCCCAAGCATCAGAAATGGCTGCTTTGAAGAGATTTTCAAAGCAATGTGGCTCGTCAAGAGTATCTGATGTTGGCACCGGTAAAAAGTTGGTCGAAATCTCCCTCGTGCCAGAGATATCAAGCTCGAGTGACGATCGTTCTATTTCTTTGGTTGATTCAACAAGCTCGAAAGAAATGACAACTAGGTCCGTGTCCCGAGATCAGATCGTTCCTTTTCCACCTGAAGTTGAAGCTGACAAGCCAACGATACAAACCAAGGAAGGGCTAGAGGTTAGAACGAATCTTGCTACCGAGAGTAAATCTTGTCTCGGTTCTTCAATGCCGGATAAGGAAAAGGACGAAAATTTACCTTGTGCATCTTGTCCGCGGAGCTCTAGCAATGATAGTTCAGTGGACAAACCCTCGAGTATTAGTACATGTTTGGCGAAGCCGATATTCAATAACATGAACTTCCTGAAGAAAAAGGTAAAGAGAGATCTATGTTCTGCATCGAGCTGCTCTACTAGTAGATTCGACAAGGAGAATGGAAATTCTGATCTTAACCGTGAAGTGAGAGAAAACGATGAAAAACTATCACCCTGCAGTTCGAAGCATAGCATTGAAGTTAACTCGATAAATGTTAATAGAGATTCAGATAGCAAACGCGGTTTTGGTTTGAATTGCAATAAGAAAACTAAGTTTCTTCTTTCAAAAGTTGACGAGAAATCAAGATCAAAGGAAAAGGGCGAGTTCTCTCATAGCTCAAAAAGTAGCATTGGTGAGTATAGTACTAGTAGCACAAGCATCAGCGAGGAGAGCAATCTAAGCAGCTCGAGCCGCAGCGGCCAACGACCGCACATGTCAAAACACTCGAGATGGGAAGCTATTCGGGCGGTTCAACAGCAGCATGGTAATTTAAATTTAAAGCATTTCAAGCTGATAAGGAAGCTTGGTAGTGGAGATATCGGAACCGTTTATCTTGCAGAATTAATCGGGACTAGTTGCCTTTTTGCACTGAAAGTTATGGACAACGATTTTTTGGCAAGCAGGAAGAAAACATTTAGGGTTCAAACCGAAAGAGAGATCCTTCAAATGTTGGATCATCCATTTCTTCCTACACTTTATTCTCATATTACTACATATAAGCTCTCTTGCTTGGTCATGGAGTATTGTCCAGGCGGTGATCTGCACGTGCTGCGACAGAAGCAAACATACAAGAGCTTTTCGGAGCACGCAACAAGGTTTTATGTTGCTGAAGTTCTTCTTGCCCTTGAGTATTTGCACATGATGGGAGTTGTATATCGAGATCTAAAGCCGGAAAACATCCTTGTACGCGAAGATGGACATATAATGCTGACAGATTTTGACTTGTCACTCAGATGTTCTGTCAATCCAATGTTAGTCAAATCATCTTCACCCGATGCAGATGTGGCAAAGAAGATCTCCGGTTCTTGTTCGGGAACTAGCTGCATACACCCTTTCTGTCTTCAACCGGATTGGCAAGTTTCGTGCTTTACTCCTAATCTTTTGTCTCCGGGAGCAAAATCTCGAAAGATGAAGGCTGACAACATATGTGCTCAAATTGGTCCACTGCCGCAACTTGTTGTCGAGCCTACTAATGCACGGTCCAACTCCTTCGTTGGAACGTACGAATACCTTGCTCCGGAGATCATCAAAAGCGAGGGGCATGGAAATGCTGTAGATTGGTGGACTTTCGGTATACTTTTGTTCGAGCTTTTATACGGAAAAACTCCCTTCAAAGGTCCATCAAACGACGATACATTATCCAACGTCGTGTCACAGAACCTCAAGTTTCCAGGTACTCCTATAGTCAGTTTTCATGCAAGAGATTTGATCAGAGGGTTGTTGATGAAGGATCCTGAAAATCGATTAGGTTCTGTAAAAGGCGCTGCGGAAATAAAACAGCATCCTTTCTTTGATGGCCTCAACTGGGCTCTAATACGGTGCGCTGCGCCACCGGAGCTCCCGAACGTTCACGATTCCGGAACTAGTGCTTCACTTATGGCTGCACATAAGGAAAATGCAAATGATTTATATGATATAGATGATTGTGAAGAGTTTGAGCTGTTTTAG 2382 0.4299 MNTSTYTCEIVESREEILPEFDTDEKPESSCSYRLGKRYSIEDDIDRLFQAIEIHKGSSRGHSMSRSQKSALKRPIKVCSSQVSGIGIAERVSLKQALRGLCISQASEMAALKRFSKQCGSSRVSDVGTGKKLVEISLVPEISSSSDDRSISLVDSTSSKEMTTRSVSRDQIVPFPPEVEADKPTIQTKEGLEVRTNLATESKSCLGSSMPDKEKDENLPCASCPRSSSNDSSVDKPSSISTCLAKPIFNNMNFLKKKVKRDLCSASSCSTSRFDKENGNSDLNREVRENDEKLSPCSSKHSIEVNSINVNRDSDSKRGFGLNCNKKTKFLLSKVDEKSRSKEKGEFSHSSKSSIGEYSTSSTSISEESNLSSSSRSGQRPHMSKHSRWEAIRAVQQQHGNLNLKHFKLIRKLGSGDIGTVYLAELIGTSCLFALKVMDNDFLASRKKTFRVQTEREILQMLDHPFLPTLYSHITTYKLSCLVMEYCPGGDLHVLRQKQTYKSFSEHATRFYVAEVLLALEYLHMMGVVYRDLKPENILVREDGHIMLTDFDLSLRCSVNPMLVKSSSPDADVAKKISGSCSGTSCIHPFCLQPDWQVSCFTPNLLSPGAKSRKMKADNICAQIGPLPQLVVEPTNARSNSFVGTYEYLAPEIIKSEGHGNAVDWWTFGILLFELLYGKTPFKGPSNDDTLSNVVSQNLKFPGTPIVSFHARDLIRGLLMKDPENRLGSVKGAAEIKQHPFFDGLNWALIRCAAPPELPNVHDSGTSASLMAAHKENANDLYDIDDCEEFELF* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5369 793 Gene3D Transferase(Phosphotransferase) domain 1 636 760 - -
Psa5g5369 793 Gene3D Phosphorylase Kinase; domain 1 405 486 - -
Psa5g5369 793 MobiDBLite consensus disorder prediction 203 237 - -
Psa5g5369 793 PANTHER FLIPPASE KINASE 1-RELATED 1 772 - -
Psa5g5369 793 Gene3D Transferase(Phosphotransferase) domain 1 487 555 - -
Psa5g5369 793 MobiDBLite consensus disorder prediction 278 298 - -
Psa5g5369 793 MobiDBLite consensus disorder prediction 275 300 - -
Psa5g5369 793 MobiDBLite consensus disorder prediction 341 387 - -
Psa5g5369 793 CDD STKc_phototropin_like 405 763 - -
Psa5g5369 793 MobiDBLite consensus disorder prediction 147 170 - -
Psa5g5369 793 ProSitePatterns Serine/Threonine protein kinases active-site signature. 528 540 IPR008271 GO:0004672|GO:0006468
Psa5g5369 793 MobiDBLite consensus disorder prediction 351 380 - -
Psa5g5369 793 SMART serkin_6 407 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g5369 793 Pfam Protein kinase domain 639 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g5369 793 Pfam Protein kinase domain 408 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g5369 793 SUPERFAMILY Protein kinase-like (PK-like) 380 760 IPR011009 -
Psa5g5369 793 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL1 ISOFORM X1 1 772 - -
Psa5g5369 793 ProSiteProfiles Protein kinase domain profile. 407 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g5369 793 MobiDBLite consensus disorder prediction 222 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5369 Psa-Chr5 467738913 467742591 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5369 284 793 AGC Kinase Gene Family AT3G52890 61.111 0.0 636
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Psa5g5369 Pkinase 1.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5369 - - gmx:100784955 1132.09