Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5311 ATGGACATTGAAACTAAGATAGTGAACCCTAGTAACACACTCAAAATTAAGATTGCAACAAGTAGTAGCAAAAAACAAAGTGATGATAGTTCAAGTTTACCTTCACCAAACACAAAAACTTCCATAGAATCATCATCATCACCTTATGATCAATCTCCTCTTGTTTCACCGCCTTCATCAGCATTTGTTTCAGCTTTGCAATCTCCATATATATCTCCAAGAGCCACAATTCCAAACCCTAATAGTACTATTACTACTACTACTACAAATCCTTCAACTCCAGAAGATGTTCCTAGTAGTTCCTACACTCCTCCTTCTGATCCTTATGAGTTTTCTGATGACACTTCTGATACAAAGCTCAAATTTATGACATGTGTTCCTGAAACAGTTCCTCCAAGAATCTCATTCTCATTTCCAGTTCCTAGGGTTTCCTTTGGGAAAACCTCTGTTTCCCCTGCTACTAAAAACTCCAAACTTGGAAGCTGTGATGTCTACATTGGATTCCATGGACAAAATCCGAATCTTATTCGCTTCTGCAAGTGGCTTAAATCTGAGCTTGAGCTTCAAGGGATTGATTGTTTACTTGCTGATAGGTCAAAGTATTCAGATATTCAAAGCCATGAGATCGCTGATAGAGTCATTTGCTCGGTCGCATTCGGTTTAGTGATCGTCACAAGTTCGAGTTTCCTCAACCGGTTAAGCATGGAAGAGGTGAGATTTTTTGCTCAAAAGAAGAATTTGATTCCTATATTCTTTGACACATTGCCTGCTGAGATTATATCACTTCTTAATTGCAATTCAATTGATAAAGAATGTAAAGAAGCGATCGACGGACTCGTGAAATGTAATGAGTTCTGTTTAGAAGCTAATGATGGTAATTTAAGAAGTTGCATATCGAAAGTTTCGAGTATTTTAAGAGCAAGACTTGGTAGGAAGAATGTTGGTCATAAGGATAATCATAGTATGCTAGGGTTTGAGGATTTATTACCTTTTCCAAAGAATGCATATTTTGTGGGAAGAGAGAAAGAGATTATGGAGATTGAAGGTTTACTTTTTGGAAATCGGAATTTTTGTACGGAACAACACGTTCAAGATCATTGCAGAGCAAGTGGTAGCGGACAAAGTGAAGGCCTTGCAGACGAAGAAAGTGAAACTACGGTTGGAAAAGGCGGTGGTGGAAGGTATATAAGCTTAGAGATAGGGAGGAACAAAGAACCAAATTTAGAAGCATGGATTGAACAACCGATTATAGGAAACAATTCATCGAAGAGGTTGAAGAATAAGAAGTCGAAAAATGGAAGCTACAATAAGAGTTTATGTAGTATTAGCAGCGTGATTTGCATTAGCGGAGTCTCTGGTATTGGAAAATCGGAATTGGCGTTAGAGTTTGCTCATAGATGTTACCAAAGGTACAAGATGGTTTTGTGGATTGGTGGCGAAGCTAGAAATCTTAGGCAGAACATATTGAACTTGTCAAGAAATTTTGGTTTAGATGTTGGTGCCGATTCCGAGACAGAAAGAGGTAGAATTCGAAGCTTTGAGGAGCAAGAATTAGAAGCGTTCAAGAGAATCAAGAGGGAACTTTTCGGTGACACGCCTTACTTGTTGATAATTGATAATCTTGAGACTGAAGAGGAATGGTGGGAAGGGAAAGATTTGTATGATTTGATACCGAAAAACAACACAGGAGGGACTCATGTCATTATTACTACTAAGCTTTCCAAGGTAAAGAACTATGATATGATTCATCTCCCTCCATTGCCATTATCTGATGCAATGATTTTGATAAGAGGAAGAAAAAGAAAAGAGTATTCGATGGATGAAGTAAATTTCCTCGAAAAATTCTATGAGAAACTTGGTAGATTAAGCTTTGGTTTGATGATGATCGGCTCTCTGTTGTCTGAACTTGCAGTTAGTCCTTCTGCACTCTTCGAGTCCATTAACCAAGTTCCGCTGAATGAAGATTCAATCTCTGGTTATATGAGTACTTCACAAGAACAATGGTGCAAGAACAATCTTTTCCTCATGAAGACTTTTCTTTTTTGTTTCGAAACTTTGGAGAAAACTAAAGCGAAAGGGAATGTTCTTGCTATAAGAATGCTTCTTGTTGGTGGTTGGTTTTCTCCTGCTCCAATTTCAGTCAGTTTGTTAACCAATGCAGCGAAGAGTGTTTCCACAAGTGAAAACCATCTCAAGAAGTGGACAAACTGTACAAGCCTAACATCGAGTTGTTTATCGCCGCGCACGTGGAAAGACGAAGAAGACTCGGCTATACTACTTGTGAAATTTGGACTAGCAAAAAGGACTAATCTACATGAGGATGGAATCTGGCTTCATTTCCATTCCATAACACAAACATTTGCTAAAAGAAAAGGCGGCTTGAAATACGCAAAGGCTGCGATCCAAGGAGTAAGAAAAATAAGCAACCATGTAATCTCAGATCATTTATGGGAATCAGCTTTTCTTGTTTTCGGATTCAAATCCGAGCCACCGGCCGTGGAGCTAAAGGCAACCGACATGGTTTTATACATCAAAAGAACAGCTCTTCCTCTCGCAATTCAAGCCTTCACCTTGTTTTCGAGATGCAATTCGTCTTTAGAACTCTTAAAAGTCTGCACGAACGCACTCGAGGAAGTTGAAAAGTCTTTTGTGACTCAAATACAAGATTGGTCTCATGATTCAATTTGTTGGAAGAAAAGATTGCAAAGAAGACAAAAGGTTGATGAGTATGTGTGGCAAGATGTTACCTTGTTGAAGGCAACATTGCTTGAGACAAGAGCTAAGTTGTTAGCTAGAGGAGGAGAGTTAGACAGTGGTAAGGAACTTTGTAGGACATGTATTAGTATTAGAACTGTGATGCTTGGACATAACCATGCACTAACCTTAGCTGCTCAAGAGACACTAGCTAGGTTGGTGAGAATGAGGAGTAAGATATGA 2937 0.3885 MDIETKIVNPSNTLKIKIATSSSKKQSDDSSSLPSPNTKTSIESSSSPYDQSPLVSPPSSAFVSALQSPYISPRATIPNPNSTITTTTTNPSTPEDVPSSSYTPPSDPYEFSDDTSDTKLKFMTCVPETVPPRISFSFPVPRVSFGKTSVSPATKNSKLGSCDVYIGFHGQNPNLIRFCKWLKSELELQGIDCLLADRSKYSDIQSHEIADRVICSVAFGLVIVTSSSFLNRLSMEEVRFFAQKKNLIPIFFDTLPAEIISLLNCNSIDKECKEAIDGLVKCNEFCLEANDGNLRSCISKVSSILRARLGRKNVGHKDNHSMLGFEDLLPFPKNAYFVGREKEIMEIEGLLFGNRNFCTEQHVQDHCRASGSGQSEGLADEESETTVGKGGGGRYISLEIGRNKEPNLEAWIEQPIIGNNSSKRLKNKKSKNGSYNKSLCSISSVICISGVSGIGKSELALEFAHRCYQRYKMVLWIGGEARNLRQNILNLSRNFGLDVGADSETERGRIRSFEEQELEAFKRIKRELFGDTPYLLIIDNLETEEEWWEGKDLYDLIPKNNTGGTHVIITTKLSKVKNYDMIHLPPLPLSDAMILIRGRKRKEYSMDEVNFLEKFYEKLGRLSFGLMMIGSLLSELAVSPSALFESINQVPLNEDSISGYMSTSQEQWCKNNLFLMKTFLFCFETLEKTKAKGNVLAIRMLLVGGWFSPAPISVSLLTNAAKSVSTSENHLKKWTNCTSLTSSCLSPRTWKDEEDSAILLVKFGLAKRTNLHEDGIWLHFHSITQTFAKRKGGLKYAKAAIQGVRKISNHVISDHLWESAFLVFGFKSEPPAVELKATDMVLYIKRTALPLAIQAFTLFSRCNSSLELLKVCTNALEEVEKSFVTQIQDWSHDSICWKKRLQRRQKVDEYVWQDVTLLKATLLETRAKLLARGGELDSGKELCRTCISIRTVMLGHNHALTLAAQETLARLVRMRSKI* 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5311 978 MobiDBLite consensus disorder prediction 18 60 - -
Psa5g5311 978 PANTHER DNA REPAIR PROTEIN RADA 13 978 - -
Psa5g5311 978 Gene3D - 422 582 IPR027417 -
Psa5g5311 978 Gene3D - 143 275 IPR035897 -
Psa5g5311 978 MobiDBLite consensus disorder prediction 369 389 - -
Psa5g5311 978 SUPERFAMILY Toll/Interleukin receptor TIR domain 162 256 IPR035897 -
Psa5g5311 978 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 329 639 IPR027417 -
Psa5g5311 978 SMART AAA_5 442 612 IPR003593 -
Psa5g5311 978 MobiDBLite consensus disorder prediction 73 111 - -
Psa5g5311 978 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 13 978 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5311 Psa-Chr5 463895680 463899636 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5311 - - gmx:100780810 1404.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5311 5 463895680 463899636 Psa5g5311 5 463895680 463899636 ECH