Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5288 ATGGCCGAGGTAATTAACTTACCTCCTGAATCTCACGACCGATCTCCCACCACTGCTGCTCCTCCTCCTCAACCTCCTCCTCAATCTCCTCCAGCTGACGATGATCTCCCACCTCCACCTCTCCCTCGTCGGAGAGACTTTCGTGACGACAGGGATTTCGATCGCCGTCCCTTCCGCGGTGGAAGAGGTGGCCGAGGTGGTTACTTCAACCGTGACAGAGATTTCAAGCGCCGTCGCAGTCCTAGCCCTAATTTCCGTGACCGCCGCTATTCTCCTCCTCAGCAGTCTCGACGTTCACCTCCGCCTTTTAAGAGATCGAGAAGGGGTAGTCCGCATAGACCCAACGACAGATTTGGCTATGATCACTTTGGTGGCTATGAAAGGGGAGTGGGTGGAAGGGCTGGTTATGCAGATGATAGACCTGTTGGCAGGTTTCCACATCGATCTGGAGGGGGGTTTCAAAACGGAATTTCTGATCTAGATGCCGCTCGCGGTTATGCAGATGGGCCAAGTGGAGGTGCTCGAAGAGAGGGATTAATGTCCTATAAGCAATTCATTCAGGAGCTTGAGGATGATATACTGCCATCTGAAGCAGAGCGTAGATACCAAGAGTACAAATCAGAGTATATTACTACCCAAAAACGAGCTTATTTCAATGCTCACAAAGATGAGGAGTGGTTGAAAGATAAATATCATCCTACAAATTTACTTCCAGTTATTGAAAGGAGGAATGAAAATGCTCGGCGCCTGGCAAAGGATTTTTTGCTTGATTTGCAAAGTGGAACACTGGACATAAATCCAGGTTTAAACTCTGTGTCCACTAGATCAGAGCAGGCCAGTGAGCCAAATTCAGAGGAGGAAACAGATGCCAGTGGCAAACGAAGAAGACATGGTAGGGGATCTAATAAGGATAATGATTTCTCTGCTGCTCCAAAAGCTCACCCAGTCAGTTCTGAACCTAGAAGGATACAAGCAGAGATTCAACAGGTTCAGGCTGTTGTTCGGAAGCTTGACAAGGAAAAAGGGATTGAAGATAATATTTTATGCACCAGTGATCATAGCAAAAATGGTGATAAGGCTCACAGTGGATCTGTGGGTCCTGTAATAATTATCCGTGGCCTAACATCTATTAAGGGCTTAGAAGGTGTTGAGCTGCTGGACACACTGATAACATACCTTTGGCGGATTCATGGTGTAGATTATTACGGAATGCTTGAGACTAACGATGCCAAGGGCTTTAGGCATGTGAGACCAGAAGGAGCAAGGCATGAAGAAACAGGTAAACTGGGGTCAGAATGGGAGAAAAAGCTTGATTCATTTTGGCAGAGAAGGTTGGAAGGCCAGGATCCCTTGGAAGTAAGGACTGCAAAGGAGAAGATAGATGCTGCAGCAGCTGACATGTTGGATCCATATGTTAGAAAGATTAGGGATGAAAAGTATGGATGGAAATATGGATGTGGAGCCAAGGGTTGCACAAAGCTTTTTCATGCGGTTGAGTTTGTGTACAAACATCTCAAGCTAAAACATCCAGAGCTTGTGTTGGAGCTAACTTCAAAATTGCGTGAAGATCTTTATTTTCAAAATTACATGAATGATCCTGATGCTCCTGGTGGAACCCCTGTCATGCAGCAATCTCAGAAGGACAAGCCTTTAAAGCGCAGATTACTGGATGGCCGTTTGAAAGATGATCGTGGGAATCAGCGAGACCAGGATAGGAGTGACCGAACAAATGGAGATAGACCCGACAGTTCTCCATCCCGTGAAAGGCGGTTGGGAGGCCGTGATGAAACTATGTTTGATGCATATGGAGGGCCTGCTGTACCTCAATTCTCCTCAGATATGCACCCTCCTCCTTCAGTTTTGATGCCTGTACCTGGTGCCGGGCCTCTGGGACCCTTCGTTCCTGCGCCACCAGAAGTTGCAATGCAGATGTTTAGGGATCAAGGACCATCTTCATTTGATACCTCAGGGATGACTATGCGTTCTGGTCCTCAAATAGGGGGACAGACCTCTATGATTGCTGTTCCTCCAGCCTTTAGACCTGATCCTCGACGGATGCGAAGTTATCAAGATTTGGATGCCCCTGAAGAAGAAGTTACTGTTATTGATTATCGGAGCTTGTAA 2124 0.4703 MAEVINLPPESHDRSPTTAAPPPQPPPQSPPADDDLPPPPLPRRRDFRDDRDFDRRPFRGGRGGRGGYFNRDRDFKRRRSPSPNFRDRRYSPPQQSRRSPPPFKRSRRGSPHRPNDRFGYDHFGGYERGVGGRAGYADDRPVGRFPHRSGGGFQNGISDLDAARGYADGPSGGARREGLMSYKQFIQELEDDILPSEAERRYQEYKSEYITTQKRAYFNAHKDEEWLKDKYHPTNLLPVIERRNENARRLAKDFLLDLQSGTLDINPGLNSVSTRSEQASEPNSEEETDASGKRRRHGRGSNKDNDFSAAPKAHPVSSEPRRIQAEIQQVQAVVRKLDKEKGIEDNILCTSDHSKNGDKAHSGSVGPVIIIRGLTSIKGLEGVELLDTLITYLWRIHGVDYYGMLETNDAKGFRHVRPEGARHEETGKLGSEWEKKLDSFWQRRLEGQDPLEVRTAKEKIDAAAADMLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAVEFVYKHLKLKHPELVLELTSKLREDLYFQNYMNDPDAPGGTPVMQQSQKDKPLKRRLLDGRLKDDRGNQRDQDRSDRTNGDRPDSSPSRERRLGGRDETMFDAYGGPAVPQFSSDMHPPPSVLMPVPGAGPLGPFVPAPPEVAMQMFRDQGPSSFDTSGMTMRSGPQIGGQTSMIAVPPAFRPDPRRMRSYQDLDAPEEEVTVIDYRSL* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5288 707 MobiDBLite consensus disorder prediction 38 85 - -
Psa5g5288 707 MobiDBLite consensus disorder prediction 533 595 - -
Psa5g5288 707 Pfam Arsenite-resistance protein 2 427 605 IPR007042 -
Psa5g5288 707 MobiDBLite consensus disorder prediction 280 303 - -
Psa5g5288 707 Pfam SERRATE/Ars2, N-terminal domain 183 264 IPR021933 -
Psa5g5288 707 ProSitePatterns Zinc finger C2H2 type domain signature. 486 509 IPR013087 -
Psa5g5288 707 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 1 707 - -
Psa5g5288 707 MobiDBLite consensus disorder prediction 267 322 - -
Psa5g5288 707 MobiDBLite consensus disorder prediction 1 124 - -
Psa5g5288 707 MobiDBLite consensus disorder prediction 547 595 - -
Psa5g5288 707 PANTHER ARSENITE-RESISTANCE PROTEIN 2 1 707 IPR039727 GO:0006397
Psa5g5288 707 MobiDBLite consensus disorder prediction 15 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5288 Psa-Chr5 462542895 462555197 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5288 85 707 C2H2 Transcription Factor Family AT2G27100 61.187 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5288 - - gmx:100817569 1041.57