Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5281 ATGAAAGAACTAAACACTTCCGAGTTTGAACAATGGCATACATCCTATGAAGCAGCGAGCACTGCAGTGTTTGGAAGGGCTGCAATGCTTAGAAAAATCTCAAACCATGTTGAAAACAATGTTTGCATATTAGGAGCTTCTGCTATCGAAGATAAACTTCAACACGGCGTTCCAGAAGCAATCGAGTCTCTAAGGACAGCAGGGATTAAAGTTTGGGTGTTAACCGGTGACAAGCAAGAAACGCTGAAACTTGATGCAGTTTCAACGCAGATCGCTTTGATTATCGATGGTGGAAGCCTCGTTCATATCTCGATACTGATCACGAAGAAGAGTTATTTCAACTTGCGAGTTTGTGTTCTGTTGTTCTTGTGTTGTCGAGTTGCTCCTCTGCAAAAAGCCGGTATTGTTTCCCTTGTGAAGAAGAGAACATCTGACATGACACTAGCCATTGGAGACGGTGCTAATGATGTTTCAATGATTCAAATGGCTGATGTCGGAAGTCGGCATCAGTGGACAAGAGGGCAGGCAAGCTGTAATGTCCATCAGATTTCGCAATGGGACAGTTTAGGTTTTAGTTCCTCTCTTGTTGGTTCATGGTCACTGGAATTACCAAGGCTTGGTTACATGATACTTACAATTTCTAACAGAAATGCTGTCTTGTTCTTGTCTATTCTGGTGTTTGATATGACACTGACACGTGTGACTACTGTCAATATCTGTGTTAATGTCAGTGTTTATAAGATAATGATTATTGCGTGCCTTTCTTTTTTAGATACTTGTGGCAAAGCATGTTATATTTGGCCTCCCATTTTTGCATATTGGAAAAGTACTATTGATGTAGCAAGTATAGGTGACCTTTGGACTTTGGCAGTGGTTATTTTGGTGAATTTGCACTTGGCTATGGATGTTGTTAGATGGTATTGGGTGACTCATGCTGTCATTTGGGATCTATGCTGTTACTTTCATTGCTGTCATGATCATTGA 984 0.4085 MKELNTSEFEQWHTSYEAASTAVFGRAAMLRKISNHVENNVCILGASAIEDKLQHGVPEAIESLRTAGIKVWVLTGDKQETLKLDAVSTQIALIIDGGSLVHISILITKKSYFNLRVCVLLFLCCRVAPLQKAGIVSLVKKRTSDMTLAIGDGANDVSMIQMADVGSRHQWTRGQASCNVHQISQWDSLGFSSSLVGSWSLELPRLGYMILTISNRNAVLFLSILVFDMTLTRVTTVNICVNVSVYKIMIIACLSFLDTCGKACYIWPPIFAYWKSTIDVASIGDLWTLAVVILVNLHLAMDVVRWYWVTHAVIWDLCCYFHCCHDH* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5281 327 Pfam haloacid dehalogenase-like hydrolase 43 164 - -
Psa5g5281 327 Gene3D - 40 86 IPR023214 -
Psa5g5281 327 Gene3D - 87 179 IPR023214 -
Psa5g5281 327 PRINTS P-type cation-transporting ATPase superfamily signature 67 77 - -
Psa5g5281 327 PRINTS P-type cation-transporting ATPase superfamily signature 150 169 - -
Psa5g5281 327 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 254 316 - -
Psa5g5281 327 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 87 239 - -
Psa5g5281 327 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 81 - -
Psa5g5281 327 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 87 239 - -
Psa5g5281 327 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 254 316 - -
Psa5g5281 327 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 81 - -
Psa5g5281 327 SUPERFAMILY HAD-like 38 166 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5281 Psa-Chr5 462335112 462336900 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5281 1 315 Primary Pumps ATPases AT5G04930 44.836 6.44e-86 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5281 K14802 - gmx:100813836 300.056