Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Psa5g5280 | ATGGGTTCTCTCGATACACCAATCAGCGCGGAAAACGGTTCCGCACACGCCTCCGGCCACGGCAAATCTCCGTTGACTGATGGCGGTGCACGCGCCGCGCCGGCAGATTCGGTGCCGGAGTTTGAACCGTCGAAGCGGAGGAGATCGTCTATGCTTCCCTTGGAGGTTGGGACGCGCGTGATGTGCCGTTGGAGGGACGGGAAGTACCATCCTGTCAAAGTCATAGAACGCCGCAGAGTCCATGGCTGTGGACCCAACGATTATGAGTATTACGTTCACTACACTGAGTTCAATAGGAGGCTTGATGAGTGGGTGAAGCTTGACCAGCTTGATCTTGATTCTGTGGAGGCAGTTGTTGATGAGAAAGTGGAGGAGAAGGGGGCATCAGGTTTGAAGATGACACGCCACCAAAAGAGAAAGATCGATGAGACACATGTAGAGGGCCATGAGGAGCTTGATGCTGCAAGTTTGCGAGAACATGAAGAGTTCACAAAAGTGAAAAATATAGCTACTATTGAACTTGGAAGATATGAGATTGAGACGTGGTACTTCTCCCCGTTCCCATCAGAATACAATGACTGTTTGAAGCTGTTCTTTTGTGAGTTTTGCCTTAATTTCATGAAGCGCAAAGAGCAGCTTCAGAGGCATATGAAAAAATGTGATCTTAAGCATCCCCCTGGCGATGAGATATACAGAAGTGGTACACTGTCAATGTTTGAGGTTGATGGCAAGAAGAACAAGGTTTATGGGCAGAATCTTTGTTATTTGGCCAAGTTATTTCTTGATCACAAGACCCTCTATTATGATGTTGACCTGTTTCTTTTCTATGTTTTGTGTGAATGTGATGAACGGGGATGCCACATGGTTGGATATTTTTCCAAGGAAAAACATTCCGAGGAATCTTACAATTTGGCATGTATCCTCACCCTTCCACCTTACCAAAGGAAAGGCTATGGAAAATTTCTAATTGCTTTCTCATATGAACTTTCGAAGAAGGAAGGTAAAGTCGGCACTCCTGAAAGACCCCTTTCAGACCTTGGACTGCTAAGTTACAGAGGATATTGGACCAGGGTTCTTCTAGACATTCTGAAAAAGCACAAGGGAAACATTTCTATCAAGGAGCTGAGTGATATGACTGCCATTAAAGCTGAAGATATATTGACAACTCTTCAGAGCCTAGAACTGATTCAATACAGGAAAGGACAGCATGTCATTTGTGCAGATCCAAAAGTTTTGGATCGCCATCTTAAAGCAGCTGGCAGAGGAGGTCTCGACGTTGATGTTTGCAAATTGATCTGGACACCTTACAAAGAACAAAGTTGA | 1323 | 0.452 | MGSLDTPISAENGSAHASGHGKSPLTDGGARAAPADSVPEFEPSKRRRSSMLPLEVGTRVMCRWRDGKYHPVKVIERRRVHGCGPNDYEYYVHYTEFNRRLDEWVKLDQLDLDSVEAVVDEKVEEKGASGLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPSEYNDCLKLFFCEFCLNFMKRKEQLQRHMKKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDERGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGYWTRVLLDILKKHKGNISIKELSDMTAIKAEDILTTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLDVDVCKLIWTPYKEQS* | 441 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Psa5g5280 | 440 | PANTHER | HISTONE ACETYLTRANSFERASE | 18 | 440 | - | - | |
| Psa5g5280 | 440 | Gene3D | - | 44 | 164 | - | - | |
| Psa5g5280 | 440 | Gene3D | - | 343 | 423 | IPR036388 | - | |
| Psa5g5280 | 440 | CDD | CBD_MOF_like | 57 | 126 | - | - | |
| Psa5g5280 | 440 | SMART | chromo_7 | 68 | 127 | IPR000953 | - | |
| Psa5g5280 | 440 | Pfam | MYST family zinc finger domain | 166 | 220 | IPR040706 | - | |
| Psa5g5280 | 440 | Gene3D | - | 165 | 221 | - | - | |
| Psa5g5280 | 440 | PANTHER | HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2 | 18 | 440 | - | - | |
| Psa5g5280 | 440 | CDD | NAT_SF | 275 | 334 | - | - | |
| Psa5g5280 | 440 | Pfam | RNA binding activity-knot of a chromodomain | 54 | 112 | IPR025995 | - | |
| Psa5g5280 | 440 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 165 | 436 | IPR016181 | - | |
| Psa5g5280 | 440 | MobiDBLite | consensus disorder prediction | 1 | 49 | - | - | |
| Psa5g5280 | 440 | SUPERFAMILY | Chromo domain-like | 47 | 165 | IPR016197 | - | |
| Psa5g5280 | 440 | ProSiteProfiles | MYST-type histone acetyltransferase (HAT) domain profile. | 164 | 435 | IPR002717 | GO:0004402|GO:0006355|GO:0016573 | |
| Psa5g5280 | 440 | Pfam | MOZ/SAS family | 225 | 402 | IPR002717 | GO:0004402|GO:0006355|GO:0016573 | |
| Psa5g5280 | 440 | Gene3D | - | 223 | 435 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Psa5g5280 | 4 | 440 | C2H2 Transcription Factor Family | AT5G64610 | 85.126 | 0.0 | 771 |