Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa5g5243 | ATGGATAGGATTCAAGAGGGAGATGAAAATGGTAAATGTTCAGTTGTTGGTTTAGCAATCAAAGGTAACAAGAAAAGCAAGTATGTTGTACAATGGGCACTTGATAAATTTGTTGCTGAAGGAGTGCTTATTTTCAAGCTTATTCATGTTAGGGCTGTTATCAAAGGAGTTCCAACACCAATGGGAGACGTGCTTCCTCTTTCGCAAGTGCGGAATGACGTAGCAATGGCTTTCAAAAGGGAAATCGAGTGGCAAACAAATCATATGATTCTACCTTTTAAGAGCTTGTGCGAACAAAGAAAGGTGCATGTAGATGTTGTAGTGATTGAATCGGATGATGTAGTAACTGCGATAGCAGAGGAAGTAACTAAGGATGCTATAACCAAACTTGTCGTTGGAGCTTCGTCTTCCGGTATTTTCAGAAGTAAACATAAGGGTATGTCTGCAAAAATCTCGGTAAGCACTCCAACATTTTGTACGGTTTACGCTGTTTCAAAGGGAAAATTGTCCATACGGCAGTCAGACACGCGGATTGATGGAAATATTACCGACAACACAAGTGAAATCAGTTTTTCGTCAACCAGCTCGTCAAACTACACTTCCACCACTCACACAGATTCTGGCTCAGTTGCATCATATGCTCCCTTACACCCCTCTCCCCTTGCAACACGACGAGTTAAAGCTCTCTCGGGTGTCGAACAAACTCTCTCGAGTTTAGATGTAACTAATCATTCTAGAGGTCAGTCTCTAGATCTTGGGAGAAAGAATGCAGCTACAAGTTCTTCTAAAAACTCAGATGTTGATCATTACATAAGTCAGGCATCTAGCTCCGAAAGCATTTCAGATACCGAATCTCGCTTTTATGATCAAAATTCGGCCATGTTTGTGCCTCAAGTTACTAATCCTCGATCACCAAATAGACAGGAAAACATTAACCTTGAGCTGCAAAAGTTGAGAATTGAACTAAGACATGCACAAGGAATGCATGCAGTAGCTCAAAGTGAGAACACTGATGCATCACAAAAGTTGAATGAACTAAACAAGAGAAGATTAGAAGAATCCATGAAAATGAAGGAGATAATTGCCAAGGAAGAGATGGCCAAGGAATTAGCAAATCAAGAAAGAGAGAAATACGAAGCTGCAGCTAGAGAGGCTGAATATTTGAAACAATGTGCTGAAAGAGAAGCTGCGGAAAGAAAAGGAACAGAGTTGAAAGCTATCCATGCTGCCAAAGAGAAAGAAAAACTTGAGGATGCTCTGAGTGGCTCCACGCCTCAGTACCGAGTTTTTACGTGGGATGAAATAGTTTCAGCTACTTCATCTTTCTCGGAAAATCTGAGAATCGGAATGGGCGCATATGGAATGGTGTACAAGTGCACTTTGCATCACACAACTGTTGCTGTTAAAGTTATCCACTCTAATGGAATCCGCATAAGCAAGCAATTCGAACAAGAGTTAGAGATATTGAGCCGAATTCGTCATCCGAACTTGCTTCTTCTTCTCGGTGCATGTCCCGATCACGGATGCCTTGTGTATGAATATATGGAAAATGGAAACTTGGAAGATAGACTACTCCAGAAAAACGGTAATAGCCAAATCCCGTGGTTTGTTAGGTTTCGAATAGCTTGGGAAATCGCGTCGGCTCTTTCCTTTCTTCACAGCACAAAGCCACAACCTATCATCCACCGTGACTTGAAACCGGCAAACATCTTGCTTGGTGGTAACCTTGTCAGCAAGATTGGTGATGTCGGTCTTTCTACAATCCTTGACTCAGATAACTTATCTGCCATGTATAAGGACACGGCGCCTGTTGGAACACTCAGCTACATCGATCCTGAATATCAAAGAAGTGGTTTAATATCTACGAAATCCGATGTTTATGCTTTCGGATTAGTGATGTTACAGTTATTGACAGCAAAACCAGCCATAGCACTTACTCACATAGTTGAAACCGCTATTGATGATGGTAATTTAGCAGATATGTTGGATCCAAAAGCAGGATCATGGCCTATACAAGAGACACTGGAAATAGCTCGGTTAGCATTGAGCTGTGCAGAGATGCGGCGTAAGGATCGACCTGATTTGAATGATCATGTGCTACCAATGCTAGAGAGGTTGAAAGAAGTTGCTGATAAAGCTCAACATTCTGCTTCAATAGTTACTCTAAAATCCAAACCTCCCAATCATTTTATATGTCCTATACTTCAGGATGTGATGGATGATCCTTGTGTTGCTGCAGACGGATATACATACGATCGCAAAGCAATTGAAAAGTGGCTTCTAGATCACGACAAGTCACCGATGACGAATATGGCTTTACCTCATAAGTATCTAATTCCTAATTACACACTTTTATCAGCAATTTTGGAGTGGAAGACCTAA | 2382 | 0.4131 | MDRIQEGDENGKCSVVGLAIKGNKKSKYVVQWALDKFVAEGVLIFKLIHVRAVIKGVPTPMGDVLPLSQVRNDVAMAFKREIEWQTNHMILPFKSLCEQRKVHVDVVVIESDDVVTAIAEEVTKDAITKLVVGASSSGIFRSKHKGMSAKISVSTPTFCTVYAVSKGKLSIRQSDTRIDGNITDNTSEISFSSTSSSNYTSTTHTDSGSVASYAPLHPSPLATRRVKALSGVEQTLSSLDVTNHSRGQSLDLGRKNAATSSSKNSDVDHYISQASSSESISDTESRFYDQNSAMFVPQVTNPRSPNRQENINLELQKLRIELRHAQGMHAVAQSENTDASQKLNELNKRRLEESMKMKEIIAKEEMAKELANQEREKYEAAAREAEYLKQCAEREAAERKGTELKAIHAAKEKEKLEDALSGSTPQYRVFTWDEIVSATSSFSENLRIGMGAYGMVYKCTLHHTTVAVKVIHSNGIRISKQFEQELEILSRIRHPNLLLLLGACPDHGCLVYEYMENGNLEDRLLQKNGNSQIPWFVRFRIAWEIASALSFLHSTKPQPIIHRDLKPANILLGGNLVSKIGDVGLSTILDSDNLSAMYKDTAPVGTLSYIDPEYQRSGLISTKSDVYAFGLVMLQLLTAKPAIALTHIVETAIDDGNLADMLDPKAGSWPIQETLEIARLALSCAEMRRKDRPDLNDHVLPMLERLKEVADKAQHSASIVTLKSKPPNHFICPILQDVMDDPCVAADGYTYDRKAIEKWLLDHDKSPMTNMALPHKYLIPNYTLLSAILEWKT* | 794 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa5g5243 | 793 | ProSiteProfiles | Protein kinase domain profile. | 442 | 703 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa5g5243 | 793 | Coils | Coil | 308 | 349 | - | - | |
Psa5g5243 | 793 | SUPERFAMILY | Protein kinase-like (PK-like) | 423 | 697 | IPR011009 | - | |
Psa5g5243 | 793 | SMART | Ubox_2 | 729 | 791 | IPR003613 | GO:0004842|GO:0016567 | |
Psa5g5243 | 793 | PANTHER | OS02G0152300 PROTEIN | 12 | 792 | - | - | |
Psa5g5243 | 793 | Pfam | U-box domain | 727 | 792 | IPR003613 | GO:0004842|GO:0016567 | |
Psa5g5243 | 793 | Pfam | Protein tyrosine and serine/threonine kinase | 447 | 697 | IPR001245 | GO:0004672|GO:0006468 | |
Psa5g5243 | 793 | Gene3D | Transferase(Phosphotransferase) domain 1 | 515 | 725 | - | - | |
Psa5g5243 | 793 | MobiDBLite | consensus disorder prediction | 239 | 278 | - | - | |
Psa5g5243 | 793 | CDD | STK_N | 15 | 167 | - | - | |
Psa5g5243 | 793 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 726 | 793 | IPR013083 | - | |
Psa5g5243 | 793 | MobiDBLite | consensus disorder prediction | 190 | 212 | - | - | |
Psa5g5243 | 793 | ProSiteProfiles | U-box domain profile. | 725 | 793 | IPR003613 | GO:0004842|GO:0016567 | |
Psa5g5243 | 793 | ProSitePatterns | Protein kinases ATP-binding region signature. | 448 | 469 | IPR017441 | GO:0005524 | |
Psa5g5243 | 793 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 560 | 572 | IPR008271 | GO:0004672|GO:0006468 | |
Psa5g5243 | 793 | Coils | Coil | 361 | 395 | - | - | |
Psa5g5243 | 793 | Gene3D | Phosphorylase Kinase; domain 1 | 420 | 514 | - | - | |
Psa5g5243 | 793 | SMART | serkin_6 | 442 | 703 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa5g5243 | 793 | SUPERFAMILY | RING/U-box | 724 | 792 | - | - | |
Psa5g5243 | 793 | PANTHER | U-BOX DOMAIN-CONTAINING PROTEIN 35 | 12 | 792 | - | - | |
Psa5g5243 | 793 | Gene3D | HUPs | 10 | 146 | IPR014729 | - | |
Psa5g5243 | 793 | CDD | RING-Ubox_WDSUB1_like | 730 | 770 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa5g5243 | Psa-Chr5 | 460796976 | 460800589 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa5g5243 | 15 | 793 | U-box Gene Family | AT4G25160 | 52.509 | 0.0 | 817 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-IXb | Psa5g5243 | PK_Tyr_Ser-Thr | 1.8e-39 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa5g5243 | - | - | gsj:114409387 | 1134.78 |