Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5228 ATGTTTTCTTTCTACCAAATATCAACCTTCAAAACCAACATGGCGAAGTTTACCCTTCTGTTCCTTCTCCTAACTCTACTCTCAATGGCAACATCAACACCAACACCAACAAGTTTCATCAAATCCTCATGTAGCACAACACCATACCCAACACTTTGTCTTGAATCTCTTTCTGTCTATGCAACAATAATCCAACAAGATCCACACCAATTAGCCGAAACAGCTTTATCACTTAGCCTCAACAAAACTCAAACCACAAAAGGCTTTGTTACAATGTGCAATACATTCAAAAATCTTAAACAAAGAGAATATGCTGCTCTTCGTGATTGTGCTGAAGAAATCAGTGATAGTGTTGATAGGCTTAGCCGTTCATTGAAAGAGCTTAAACTTTGCAAGATCAATGGTCAAGATTTCAATTGGCATATAAGCAATGTGGAGACATGGGTTAGCTCAGCTTTGACTGATGAAACCACTTGTGGAGATGGATTTAGTGGAAAATCACTTGATGGAATAATCAAAGCCTCTATTATATCTAGAATGGCTAATATTGCTCAATTTACTAGTAATGCTCTTTCACTCATTAATCAATATGCTGCTAATCACATGGAAGAAATTAAACATTAG 624 0.3654 MFSFYQISTFKTNMAKFTLLFLLLTLLSMATSTPTPTSFIKSSCSTTPYPTLCLESLSVYATIIQQDPHQLAETALSLSLNKTQTTKGFVTMCNTFKNLKQREYAALRDCAEEISDSVDRLSRSLKELKLCKINGQDFNWHISNVETWVSSALTDETTCGDGFSGKSLDGIIKASIISRMANIAQFTSNALSLINQYAANHMEEIKH* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5228 207 SMART PMEI_2 35 193 IPR006501 GO:0004857
Psa5g5228 207 PANTHER PECTINESTERASE INHIBITOR-LIKE 18 200 - -
Psa5g5228 207 TIGRFAM PME_inhib: pectinesterase inhibitor domain 18 197 IPR006501 GO:0004857
Psa5g5228 207 CDD PMEI-like_3 42 199 - -
Psa5g5228 207 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 197 IPR035513 -
Psa5g5228 207 Pfam Plant invertase/pectin methylesterase inhibitor 38 193 IPR006501 GO:0004857
Psa5g5228 207 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 197 IPR035513 -
Psa5g5228 207 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 18 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5228 Psa-Chr5 459940850 459941869 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5228 31 194 Carbohydrate Esterase AT3G14310 28.144 1.20e-17 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5228 - - gmx:100305900 271.166