Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5227 ATGGCAACCATGGTTTCCCTTCTTTTCCTTCTAATAACTCTTGTCTCTATAGCAACATCAACACCAACAAACTTCATCAAAACCTCATGTAGCACAACACAATATCCAACACTTTGTGTTGAATCTCTCTCTGTCTATGCATCAAAAATCCAACAAGATCCACACCAATTAGTCCAAACAGCTTTATCACTTAGTCTCAACAGAACTCAAACCACGAAAGCCTTTGTAAGAAAGTGCAAATATTTTAAGAATCTTAAACCAAGAGTATATGCTGCAATTCATGATTGTGTTGAAGTAATTAGTGATGGTGTTGATAGGCTTGGCAGTTCATTGAACGAGCTTAAACTTTGCAAGATCAACGGTCAAGATTTCAATTGGCATATAAGTAATGTTGAGACATGGGTTAGCTCAGCTTTGACTGATGGAAGCACTTGTAGTGATGGGTTTGGTGGAAAAGCACTTGATGGAAGAATCAAAACCTCCATTAGATCTAGAATGGTGGATGTTGCTAAAGTTACTAGTAATGCTCTTGCACTTATTAATCAATATGCTGCTAATCACTAG 564 0.3723 MATMVSLLFLLITLVSIATSTPTNFIKTSCSTTQYPTLCVESLSVYASKIQQDPHQLVQTALSLSLNRTQTTKAFVRKCKYFKNLKPRVYAAIHDCVEVISDGVDRLGSSLNELKLCKINGQDFNWHISNVETWVSSALTDGSTCSDGFGGKALDGRIKTSIRSRMVDVAKVTSNALALINQYAANH* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5227 187 CDD PMEI-like_3 28 185 - -
Psa5g5227 187 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 24 183 IPR035513 -
Psa5g5227 187 Gene3D Invertase/pectin methylesterase inhibitor family protein 21 183 IPR035513 -
Psa5g5227 187 Pfam Plant invertase/pectin methylesterase inhibitor 24 179 IPR006501 GO:0004857
Psa5g5227 187 PANTHER PECTINESTERASE INHIBITOR-LIKE 5 186 - -
Psa5g5227 187 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 183 IPR006501 GO:0004857
Psa5g5227 187 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 5 186 - -
Psa5g5227 187 SMART PMEI_2 21 179 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5227 Psa-Chr5 459930320 459932178 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5227 26 180 Carbohydrate Esterase AT3G14310 28.846 1.13e-18 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5227 - - gmx:100305900 271.166