Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5226 ATGGAAGCCAACACTTTTGCAAGTTTTTCTCCCAACCATGTTCTCACATTTTCAATCTTCATCTTCTTAGCAATATCTAGCATCACTTTAGCATGTGATGAAAAAAATTCTACAATCCCTACAAGTTCCACCAAAACCAACTTTTCATACACTTCCAAAACTCCCTTAAACTCCACCCAAAAAAATAATTTCAAAACCTTTATTAAAAACTCTTGCAACTCAACAACATATCCTTACATATGCTACAAATCTTTGTCCCCATATGCTTCAAAAATAGAAGAAAATCCTTTAAAACTATGCAACTTCTCTCTCTCGGCCGCGTTAAAGGCGGCTCGCGGCGCGTCGTCCGCCGTATCAAAGCTTCTAAAAAGCAATGACAATCATTTGTCAAGCATTGGTGAAGGAGTTGTGCAAGATTGCTTTGGAAATTTGAAGGATTCAATAGAACAATTGCAAGATTCTATTGATGCTATGACACATTTGGATGCTGATTTTGATAGAGAATTTCAGATTAGTAACATAAAGACTTGGGTTAGTTCTGCCATTACTAATGATCAAACTTGCTATGATGGGTTTGATGAGATGAATGTGGATTCCATACTTAGGGATCAAATTAGAAGAACGGTTTTGAATGTGGCAAGGAAGACTAGCAATGCTTTGTATTTTATCAACAATAATATATATTAA 687 0.3566 MEANTFASFSPNHVLTFSIFIFLAISSITLACDEKNSTIPTSSTKTNFSYTSKTPLNSTQKNNFKTFIKNSCNSTTYPYICYKSLSPYASKIEENPLKLCNFSLSAALKAARGASSAVSKLLKSNDNHLSSIGEGVVQDCFGNLKDSIEQLQDSIDAMTHLDADFDREFQISNIKTWVSSAITNDQTCYDGFDEMNVDSILRDQIRRTVLNVARKTSNALYFINNNIY* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5226 228 PANTHER PECTINESTERASE INHIBITOR 4 11 226 - -
Psa5g5226 228 SMART PMEI_2 63 222 IPR006501 GO:0004857
Psa5g5226 228 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 226 - -
Psa5g5226 228 Pfam Plant invertase/pectin methylesterase inhibitor 67 220 IPR006501 GO:0004857
Psa5g5226 228 CDD PMEI-like_3 71 225 - -
Psa5g5226 228 Gene3D Invertase/pectin methylesterase inhibitor family protein 64 226 IPR035513 -
Psa5g5226 228 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 66 225 IPR035513 -
Psa5g5226 228 TIGRFAM PME_inhib: pectinesterase inhibitor domain 47 225 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5226 Psa-Chr5 459873685 459875152 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5226 67 225 Carbohydrate Esterase AT1G53830 26.415 3.18e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5226 - - gmx:100527443 261.536