Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5199 ATGGCAACAATGTTTACTCTTCTTTTCCTTCTCCTAACTCTACTCTCATTTGCAACATCAACACCATCAAGTTTCATCAAAACCTCATGTAGCACCACACAATACCCTACACTTTGTGTTCAATCTCTATCTGTCTATGCATCCACAATCCAACAAGATCCACACCAGTTAGTCCAAACAGCTTTATCCCTTAGTCTCAACAAAACTCAATCCACAAAAGGCTTTGTTACAATGTGCAAAAGCTTCAAAAATCTTAAACCATCAGAATATGCTGCTCTTCATGATTGTGCTGAAGAAATCAGTGATAGTGTTGATAGGCTTAGCCGTTCATTGAAAGAGCTTAAACTCTGCAAGATCAACGAATATGCTGCTCTTCATGATTGTGCTGAAGAAATCAGTGATAGTGTTGATAGGCTTAGCCGTTCATTGAAAGAGCTTAAACTCTGCAAGATCAACGGTCAGGATTTCAATTGGCATATAAGCAATGTGGAGACATGGGTTAGCTCAGCTTTGACAGATGAGAGCACTTGTGGGGATGGATTTAGTGGAAAAGCACTTGATGGAAAAATCAAAGCTTCTATTAGATCTAGAATGGTTAATGTTGCTCAAGTTACTAGTAATGCTCTTTCACTTATTAATCAATATGCTGCTAAACACTAG 660 0.3833 MATMFTLLFLLLTLLSFATSTPSSFIKTSCSTTQYPTLCVQSLSVYASTIQQDPHQLVQTALSLSLNKTQSTKGFVTMCKSFKNLKPSEYAALHDCAEEISDSVDRLSRSLKELKLCKINEYAALHDCAEEISDSVDRLSRSLKELKLCKINGQDFNWHISNVETWVSSALTDESTCGDGFSGKALDGKIKASIRSRMVNVAQVTSNALSLINQYAAKH* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5199 219 CDD PMEI-like_3 28 217 - -
Psa5g5199 219 TIGRFAM PME_inhib: pectinesterase inhibitor domain 120 215 IPR006501 GO:0004857
Psa5g5199 219 TIGRFAM PME_inhib: pectinesterase inhibitor domain 4 119 IPR006501 GO:0004857
Psa5g5199 219 Pfam Plant invertase/pectin methylesterase inhibitor 121 211 IPR006501 GO:0004857
Psa5g5199 219 Pfam Plant invertase/pectin methylesterase inhibitor 24 115 IPR006501 GO:0004857
Psa5g5199 219 SMART PMEI_2 21 211 IPR006501 GO:0004857
Psa5g5199 219 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 23 118 IPR035513 -
Psa5g5199 219 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 116 - -
Psa5g5199 219 PANTHER PECTINESTERASE INHIBITOR-LIKE 120 219 - -
Psa5g5199 219 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 121 215 IPR035513 -
Psa5g5199 219 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 8 116 - -
Psa5g5199 219 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 120 219 - -
Psa5g5199 219 Gene3D Invertase/pectin methylesterase inhibitor family protein 20 119 IPR035513 -
Psa5g5199 219 Gene3D Invertase/pectin methylesterase inhibitor family protein 120 215 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5199 Psa-Chr5 458129946 458130637 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5199 19 212 Carbohydrate Esterase AT3G14310 24.873 6.49e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5199 - - gmx:100305900 272.707