Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5179 ATGGGGTCTCAAGTTATCAGTGACAATAATAATGAAAACCATTCGCCATTCCAGCCTTTGGCGCGGCAAAATTCAATGTACAATCTTACCCTCGATGAAGTTCAGAGTCAATTAGGTGACTTGGGAAAGCCGCTAAGTAGTATGAACCTAGACGAGCTTCTGAAAAACGTATGGACTGTCGAGGCAAACCAGACCGTTCAAATGGACAACGCGAACACAGCTCAAGCCGGACAAGTTGTTTTGCAACAGCAACCTAATATGTCCTTAAGCGGTGCGTTAAGCAAGAAAACAGTTGACGAGGTTTGGAGAGATATCCAACAAAGCAAAGACCATGAGGAGGTGATGTCTCGAGAGAGACAATCTACTTTGGGAGAGATGACATTAGAGGATTTTTTGGTGAAAGCAGGCGTTGTTACGGTTGCATCTCCTAATGGAAAGAACACTAACAGTCCTAAAGTCGACACTGTTGACTCAAACCTAGCGTTACCGCAGTTCGTTCCGCATGGTCCGTGGATGCAGCAGTATGCACGGCCACATTTTCAGCATCCACAACAAAATGTGATGCCAACTTATGTTCCAAGCCAGATGTTAGCACAGCCGTTGCACATGGTGGCCGGTTCTCCATTGGATGTTGTTCCATATGCAGATGGTCAGGTGGGACTGGCTTCGGCTTCGCCTGCGATGGGAAACTTATCGGATTCCAAGAAGTCAGGTCGCAAAAGGGGCTTACCAGAGGATGTAGCTGAGAGGACAGTCGAGAGGAAGCAGAAAAGGATGATCAAGAATCGTGAATCCGCCGCCCGTTCAAGAGCTAGGAAACAGGCCTACACAACTGAATTGGAGATCAAAGTGACGCGTCTGGAAGAGGAAAATGAAAAGCTGAGGAAAGAAAAGGAACTTTCGGACATGATAGCGAATGCTCCACAGCCCGAGCCTAAATGTCAGCTTCGCCGTGTATCTTCGGCTTCGTTCTGA 975 0.4738 MGSQVISDNNNENHSPFQPLARQNSMYNLTLDEVQSQLGDLGKPLSSMNLDELLKNVWTVEANQTVQMDNANTAQAGQVVLQQQPNMSLSGALSKKTVDEVWRDIQQSKDHEEVMSRERQSTLGEMTLEDFLVKAGVVTVASPNGKNTNSPKVDTVDSNLALPQFVPHGPWMQQYARPHFQHPQQNVMPTYVPSQMLAQPLHMVAGSPLDVVPYADGQVGLASASPAMGNLSDSKKSGRKRGLPEDVAERTVERKQKRMIKNRESAARSRARKQAYTTELEIKVTRLEEENEKLRKEKELSDMIANAPQPEPKCQLRRVSSASF* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5179 324 Coils Coil 277 304 - -
Psa5g5179 324 SMART brlzneu 250 318 IPR004827 GO:0003700|GO:0006355
Psa5g5179 324 Pfam bZIP transcription factor 254 305 IPR004827 GO:0003700|GO:0006355
Psa5g5179 324 PANTHER ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 2-RELATED 13 322 - -
Psa5g5179 324 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 257 272 IPR004827 GO:0003700|GO:0006355
Psa5g5179 324 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 13 322 IPR043452 GO:0003700|GO:0045893
Psa5g5179 324 MobiDBLite consensus disorder prediction 234 274 - -
Psa5g5179 324 MobiDBLite consensus disorder prediction 300 324 - -
Psa5g5179 324 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 252 297 IPR004827 GO:0003700|GO:0006355
Psa5g5179 324 MobiDBLite consensus disorder prediction 225 274 - -
Psa5g5179 324 CDD bZIP_plant_BZIP46 254 300 - -
Psa5g5179 324 SUPERFAMILY Leucine zipper domain 254 299 IPR046347 GO:0003700|GO:0006355
Psa5g5179 324 Gene3D - 252 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5179 Psa-Chr5 451820512 451823959 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5179 18 324 bZIP Transcription Factor Family AT3G56850 50.799 3.64e-86 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa5g5179 bZIP_1 9.7e-15 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5179 K14432 - gmx:100784924 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5179 5 451820512 451823959 Psa5g5179 5 451820512 451823959 ECH