Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5150 ATGATCAGAAACAGTGATTGTAGCAGCAGAAGAATGTTTCATCTATTATGGTTATTTACCATCAAATTCACATACCTTTTCTATTTTGTTGTAGGCCAAAACAACACCAATTCACAAGAGCTACTTGATTATAGATATGCTTGTTTGGACCAATCTTCTATTGCTCCCTCTACAACATATCAGACAAACCTCAACAATTTAATCTCTTCATTATCATCAGATTCTGCAACAAGCAATGGTTTTGGAAATAGAACTTCAGGTAGTGATCAAAACAATATAGTTTACGGACAATACCTGTGTCGCGGCGATGTTAATACAAGTCTCTGTCATTCATGTGTCCAAAACTCTAGCAGATTGTTGAAACAACACTGTCCTAATAATGCTTCAGCAATTTTGTGGTACCCTTTTTGTCTTCTGAGGTACTCGAATCAGAACTTCTTCGGTAACCTTACTATAAGACCAAGGATTCCTATGTTTGATGCAACACAGAATTTGACTAGTGCTGGTGAATTTGATAGTGATGCGAGGATTTTGATGAACGGTTTGATACAAATGGGGTCACAGACACCTTTGATGTTTGGTATGCATATGTTTAACATAAATGGTACTCAGAGACGGTACGGTTGGGTGCAGTGTAGTAGAGATATTACTAGTGAGGAATGCGGAACTTGTTTGAGTAATATGCTCGAGGATGTTGAGAATTGTTGCGAGGAGAAGAAAGTGTGGAGAGTTTTTTCTCCAAGTTGTATTATGATGTATGAAACTCAGCCGTTTTTTATAAATGATACAGTTTCTAATGCTCCTGTGCCTCAACAAGCCAAAGAAAAGGACGGAACGAAGTCATGGATCATAATAGTCATTGTAGTAATCGGAACAGTAGTAGCAGCTATACTGGCTTTGAGCACATACTACTTATGCTGCTTAAAGCATAGAAAAAATAGAAGAAATTATATGCAAAACCTTAGTCCAATCTTTCCTCAAGATCAGTCTGATATCGAGGAGACAGGAAATACTGACCTATCAATAATGCCTTTGAATACCATTCTGAAAAGTACTAATAATTTTAGTGATGAATATAAATTAGGGAAAGGTGGATTTGGAACTGTCTACAAGGGTGTTTTAGCTGATGGAAGGGAAATTGCTGTTAAAAGGCTTTCAAAAACATCAGTTCAAGGTGTGGAGGAATTAAAAAATGAAATAATATTGATTGCCAAATTGCAGCATCGAAACCTTGTGAGACTATTGGCTTGCTGCATTGAGCAAAATGAAAAGCTTCTTATCTATGAATACTTGCCTAATTCAAGCCTTGATTTCCACCTATTTGATACGGTGAAGGGAGCACAACTAGATTGGAAACAGCGATTAAATATTATTAATGGGATTGCAAAAGGGCTTCTATATCTTCATGAAGACTCTAGGCTCAGAGTTATTCATAGAGACCTGAAGGCTAGCAATATACTGTTAGATCATGAAATGAATCCAAAAATATCAGACTTTGGACTGGCGAGAACATTTGGAGGAGACCAGGATGAAGCAAGTACAATCAGAATCGTAGGAACTTATGGATACATGGCTCCAGAATATGCTATGGAAGGATTATTTTCAGTGAAGTCAGATGTTTTCAGCTTTGGAGTTCTTTTGCTAGAGATCATAAGTGGAAGAAAATGCAGCAAATTCTATCTTTCAGAGGATGGACCAAGCCTTCTCATATATGTAAGTATATGCTTGTATTCATTCTTTTCTAAAGAAAAAAATACTCACTTATAA 1767 0.3662 MIRNSDCSSRRMFHLLWLFTIKFTYLFYFVVGQNNTNSQELLDYRYACLDQSSIAPSTTYQTNLNNLISSLSSDSATSNGFGNRTSGSDQNNIVYGQYLCRGDVNTSLCHSCVQNSSRLLKQHCPNNASAILWYPFCLLRYSNQNFFGNLTIRPRIPMFDATQNLTSAGEFDSDARILMNGLIQMGSQTPLMFGMHMFNINGTQRRYGWVQCSRDITSEECGTCLSNMLEDVENCCEEKKVWRVFSPSCIMMYETQPFFINDTVSNAPVPQQAKEKDGTKSWIIIVIVVIGTVVAAILALSTYYLCCLKHRKNRRNYMQNLSPIFPQDQSDIEETGNTDLSIMPLNTILKSTNNFSDEYKLGKGGFGTVYKGVLADGREIAVKRLSKTSVQGVEELKNEIILIAKLQHRNLVRLLACCIEQNEKLLIYEYLPNSSLDFHLFDTVKGAQLDWKQRLNIINGIAKGLLYLHEDSRLRVIHRDLKASNILLDHEMNPKISDFGLARTFGGDQDEASTIRIVGTYGYMAPEYAMEGLFSVKSDVFSFGVLLLEIISGRKCSKFYLSEDGPSLLIYVSICLYSFFSKEKNTHL* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5150 588 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Psa5g5150 588 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 47 572 - -
Psa5g5150 588 Gene3D Phosphorylase Kinase; domain 1 322 430 - -
Psa5g5150 588 SUPERFAMILY Protein kinase-like (PK-like) 339 560 IPR011009 -
Psa5g5150 588 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 47 572 - -
Psa5g5150 588 ProSiteProfiles Gnk2-homologous domain profile. 42 146 IPR002902 -
Psa5g5150 588 Gene3D - 157 258 IPR038408 -
Psa5g5150 588 Gene3D - 42 146 IPR038408 -
Psa5g5150 588 ProSiteProfiles Protein kinase domain profile. 355 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g5150 588 Pfam Protein tyrosine and serine/threonine kinase 359 554 IPR001245 GO:0004672|GO:0006468
Psa5g5150 588 CDD STKc_IRAK 361 555 - -
Psa5g5150 588 ProSiteProfiles Gnk2-homologous domain profile. 153 258 IPR002902 -
Psa5g5150 588 Pfam Salt stress response/antifungal 53 144 IPR002902 -
Psa5g5150 588 Pfam Salt stress response/antifungal 163 255 IPR002902 -
Psa5g5150 588 Gene3D Transferase(Phosphotransferase) domain 1 431 576 - -
Psa5g5150 588 SMART serkin_6 355 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g5150 588 ProSitePatterns Protein kinases ATP-binding region signature. 361 383 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5150 Psa-Chr5 449417818 449424224 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5150 26 572 Receptor kinase-like Gene Family AT4G05200 42.580 2.01e-142 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa5g5150 PK_Tyr_Ser-Thr 2.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5150 - - gmx:100798691 896.73