Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5149 ATGTTGTATCTATGGCTACTTACCATCAAATTCATATGTTTTTTTCTCTTTGCTTGCACACAACCACTTGATTATAGATATGCTTGTTTAGATCAATCTTCAAATCCTCCATGGCCAAGATACCAAGCCAACCTCAACAGTTTACTCTCATTACTGTCATCACATTCTGCTAAAAGCAAAGGTTTCGGTCATGGAACTTCAGGTATCAATCAAACTCATAAGATTTACGGACTATACTTTTGTCGTGCCGATACAAACGCCACGCTTTGCAACTCGTGCGTTGAAAACTCTAGCCGATTGATAAAGCAGGTGTGCCCGAATAACGTTTCTGCTATTTTTTGGTGTCCGTTTTGTCTTCTGCGCTACTCAAATAAGAATTTCTTCGGTAAGTTATCTGTAAGACCGAGGGTCGCCATGTTTGATGCGACGCAGAATTCTACTAGTGCGGGTGAGTTTGATAGCGATGCTAGGATTTTGATGAACGGTTTGATACAAATGGGATCAGAAGCGCCTTTAATGTTTGGTACGCATATGTTTAACATAAACGGTACTCAGAGAAGGTACGGTTGGGTGCAATGTAGCAGAGATATTACTAGCGAAGAATGTAAAACTTGTTTGAGCGATATGCTTCACGAGGTTGAGAATTGTTGCGAGGAGAAGCGAGTTTGGAGAATCTTTTCGCCGAGTTGCTTTGTTATGTATGAAACTCAGCCGTTCCTTTTGAACGATGTACAGCATGACGCGAATGCGCCTCAGAAAGCGCCAGAAAAAGATGAAACAATGTCATTGATTTTAAAAATAATCATCATTGTGATCGGAGTGGTAGCAGTCGCGCTATTGGCTTTCAGTACATACTATTACAGGCGCATGGAACGAAAAAAAGTTGAAAAAGAGATGAAGAACCTTGATGCAATATTCTCTCAAGATCAGACCAACAATGCGGAGAATGTGAACCCTGACCTACCTATGATACCTCTGAGTACTATTCTAAAATGTACTGATAATTTTTCGGATAACTATAAATTGGGGGAAGGTGGATTTGGAGCTGTCTACAAGGGTGTTTTAGCAGACGGAAAGGAAATTGCTGTCAAAAGGCTTTCGAAAACTTCGGCTCAAGGATTGGAGGAATTTAAGAATGAAGTAATGTTGATTGCGAAATTGCAGCATCGGAACCTTGTGAGATTGTTGGCTTGCTGCATAGAGAAAAAGGAGAAGCTGCTTATCTATGAATACTTGCCAAATTCAAGCCTCGATGTTCAGCTACGCGATATGGTAAAGGCTGCACTGTTGGACTGGAAACGACGATTAAACATTATTAACGGGATTGCTAAAGGGATTCTGTATCTTCATGAAGACTCTAGACTCAGGGTTATTCATAGAGACTTGAAAGCTAGCAATGTACTGTTAGATCATGAAATGAATCCGAAAATCTCGGATTTTGGACTAGCAAGAACATTTGGAGGAGACCAGGATGAAGCAAGTACAATCAGAATCATAGGAACTTACGGATACATGGCTCCAGAATACGCCATCGAAGGTTTGTTTTCAGTGAAATCAGATGTTTTTAGCTTTGGTGTTCTTTTGCTAGAGATCATCAGTGGAAAAAGGAACAACAAATTCTATCTTTCAGAGCATGGCCAAAGTCTTCTTACATATGCATGGAACTTCTGGAGTGAAAGCAAAGGTTTAGAATTGATGGATCCATCGATAGCGAATTCGTATGTGGCTAGCGAAGTTTTGAAGTGCATACAGATTGGCTTATTGTGTGTACAAGATAATGCAGCGGATAGACCTACAATGTCGAGTGTTGTTCACATGCTTGGAAGTGACAATGTTACTCTTCCTAGTCCTATATGTCCGGCTTTTTCGGTTGGAAGGGCAAGAAATACATTTGAAGGAGGGACTTCATCAAATGCTTCCACCCCTGTCATCGTTAACGATGTCAACGACATAACCTTATCCGAAATGATGCCTAGGTGA 1980 0.4071 MLYLWLLTIKFICFFLFACTQPLDYRYACLDQSSNPPWPRYQANLNSLLSLLSSHSAKSKGFGHGTSGINQTHKIYGLYFCRADTNATLCNSCVENSSRLIKQVCPNNVSAIFWCPFCLLRYSNKNFFGKLSVRPRVAMFDATQNSTSAGEFDSDARILMNGLIQMGSEAPLMFGTHMFNINGTQRRYGWVQCSRDITSEECKTCLSDMLHEVENCCEEKRVWRIFSPSCFVMYETQPFLLNDVQHDANAPQKAPEKDETMSLILKIIIIVIGVVAVALLAFSTYYYRRMERKKVEKEMKNLDAIFSQDQTNNAENVNPDLPMIPLSTILKCTDNFSDNYKLGEGGFGAVYKGVLADGKEIAVKRLSKTSAQGLEEFKNEVMLIAKLQHRNLVRLLACCIEKKEKLLIYEYLPNSSLDVQLRDMVKAALLDWKRRLNIINGIAKGILYLHEDSRLRVIHRDLKASNVLLDHEMNPKISDFGLARTFGGDQDEASTIRIIGTYGYMAPEYAIEGLFSVKSDVFSFGVLLLEIISGKRNNKFYLSEHGQSLLTYAWNFWSESKGLELMDPSIANSYVASEVLKCIQIGLLCVQDNAADRPTMSSVVHMLGSDNVTLPSPICPAFSVGRARNTFEGGTSSNASTPVIVNDVNDITLSEMMPR* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5149 659 Pfam Salt stress response/antifungal 35 124 IPR002902 -
Psa5g5149 659 Pfam Salt stress response/antifungal 144 236 IPR002902 -
Psa5g5149 659 SUPERFAMILY Protein kinase-like (PK-like) 319 624 IPR011009 -
Psa5g5149 659 Gene3D - 24 127 IPR038408 -
Psa5g5149 659 Gene3D - 137 239 IPR038408 -
Psa5g5149 659 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 28 656 - -
Psa5g5149 659 ProSiteProfiles Protein kinase domain profile. 336 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g5149 659 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 28 656 - -
Psa5g5149 659 ProSiteProfiles Gnk2-homologous domain profile. 134 239 IPR002902 -
Psa5g5149 659 CDD STKc_IRAK 342 607 - -
Psa5g5149 659 ProSiteProfiles Gnk2-homologous domain profile. 23 127 IPR002902 -
Psa5g5149 659 SMART serkin_6 336 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g5149 659 Gene3D Transferase(Phosphotransferase) domain 1 412 613 - -
Psa5g5149 659 ProSitePatterns Protein kinases ATP-binding region signature. 342 364 IPR017441 GO:0005524
Psa5g5149 659 Pfam Protein tyrosine and serine/threonine kinase 340 607 IPR001245 GO:0004672|GO:0006468
Psa5g5149 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Psa5g5149 659 Gene3D Phosphorylase Kinase; domain 1 296 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5149 Psa-Chr5 449364614 449367741 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5149 8 659 Receptor kinase-like Gene Family AT4G05200 38.733 6.69e-162 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa5g5149 PK_Tyr_Ser-Thr 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5149 - - cam:101505680 960.674