Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5141 ATGAACGATTCTTCATCATGTTTCACTGATTCTTCTTCCTTTTCTGCTCCAAATACTTTTATAGGAATCGTTCTTCTCAACTCCAAAATCAGATCTTCATCTTCCTGTAACAACAGCACTCTTCTCTTTACTCGTTCTCAGCTTCTTAGAGACTTTGCAGCAAGAGAATTCAATGCTTTTCTATGGCTTTTTCTTCTTGTTATCACCTCCTTTTTGCTTACAAGACTCTTCAATGTTTTCACCTTCTTGTATAAAGCTAGAACCATTCCTGGACCTCCAGCTTCATCGTTTTTCGGACATTTCAAGCTTCTTTCCAAAGAAAATCTCACTGATGTGTTATCGAAATCTCACGAGAAGTATGGACCGATTGTTAGGCTGTGGTTAGGTCCTACTAAGCTTCTCGTGTCGGTTAAAGATCCAGTGATAATTCAAGAGATGCTCATAAAAGCTGAGAATAAGTTGCCTTTTTCTGGAAAAGCATTTCATTTAGCTTTTGGCCAATCAAGCTTTTTTTCTCCTTTGTATGAAAAGGTTCGAAAGAGAAGGGAATTATTGGAAACAGAATTGGACGAAAGATTGATGAAAACGGCTGATTTGAATCCTCGGAAGGTTGCAGACTTTATCGTAGATCAAATAGAAAAGATTAGAGTCAGAGGAAGCATTAGTTGTGGTTTGGTTTCTCGGCATATGGCTTTCACATTAATGGGAGCCACATTCTTCGGAGACGGCTTCTTGGCGTGGCCGAAGGCTGCGATATACGAAGAACTGCTTATGATGATTGCTAAAGAGGCTTGCTTTTGGGCTTCCTATAATGTTACTCCGTTTTGGAATCGAGGATTTTGGAGGTATCGACGGTTATGTAAAAAGTTAAGATGCTTAACTGAAGAGATTCTTCATTGCAGAAAGAGCTTCGAGATTTTAGACCATATCAATCAAAATGTTTGTAGCGAGAGTTCCAACCCAGAAACAAAATCAGCAAATGATCAGAAAAATTCTAAGGAAGAACATTACGGTAACATCATGAGTGTGATGCTTCATGGATCTCAAACTATAGCTACTTTAATCGCCAACGTGTTGACTAATCTTATCATGAATTCGGAAATACAAGATAAGGTTTATTCGGAGATTAGCATCGTCGGGAGAAACCCTTCAAAATACGAGCATGAAGATGTTTATAGGATGCCTTTGCTATTGGCGACAATTTATGAATCTGCGCGTCTTCTCCCCACCGGTCCCATGCTGCAGAGGTGTTCTACGAAACAAGACTTGAGATTCGCAAATGGTGTAACCGTGCCTGCTGGAGCTTTACTGGTTGTTCCGGTTCAATTGGTACAGAAGGATGACTTCAATTGGGGGAAAGATGCAAGTGATTTTAATCCGTACCGATTTCTGTCAAACGTAACAGAAGGATCAGGTTCTGAAGAACAACTTGATTATGGAATCAGCTCGTTTGTACTAAACGATCCAAGCGAAAATGCAGCATTTCTTCCTTTCGGATCCGGTACACGTTCTTGCGTTGGGCAGAAACTTGTTATCCAAGCTGTTGCCACATTGCTGGCATCGTTACTCAAGAAATATGAGATAAAGTTCAACTCGGGCTCGGATTATGACTCGGAACCATTGAAAAATCTTCCTCTTCTGCAACATCCTAATTCACAAATCCTGTTTGTGAGAAGGAACTAG 1683 0.4023 MNDSSSCFTDSSSFSAPNTFIGIVLLNSKIRSSSSCNNSTLLFTRSQLLRDFAAREFNAFLWLFLLVITSFLLTRLFNVFTFLYKARTIPGPPASSFFGHFKLLSKENLTDVLSKSHEKYGPIVRLWLGPTKLLVSVKDPVIIQEMLIKAENKLPFSGKAFHLAFGQSSFFSPLYEKVRKRRELLETELDERLMKTADLNPRKVADFIVDQIEKIRVRGSISCGLVSRHMAFTLMGATFFGDGFLAWPKAAIYEELLMMIAKEACFWASYNVTPFWNRGFWRYRRLCKKLRCLTEEILHCRKSFEILDHINQNVCSESSNPETKSANDQKNSKEEHYGNIMSVMLHGSQTIATLIANVLTNLIMNSEIQDKVYSEISIVGRNPSKYEHEDVYRMPLLLATIYESARLLPTGPMLQRCSTKQDLRFANGVTVPAGALLVVPVQLVQKDDFNWGKDASDFNPYRFLSNVTEGSGSEEQLDYGISSFVLNDPSENAAFLPFGSGTRSCVGQKLVIQAVATLLASLLKKYEIKFNSGSDYDSEPLKNLPLLQHPNSQILFVRRN* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5141 560 PANTHER THROMBOXANE-A SYNTHASE 319 531 - -
Psa5g5141 560 PANTHER THROMBOXANE-A SYNTHASE 64 162 - -
Psa5g5141 560 PANTHER THROMBOXANE-A SYNTHASE 319 531 - -
Psa5g5141 560 PANTHER THROMBOXANE-A SYNTHASE 64 162 - -
Psa5g5141 560 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 498 507 IPR017972 GO:0005506|GO:0016705
Psa5g5141 560 PRINTS P450 superfamily signature 346 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g5141 560 PRINTS P450 superfamily signature 399 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g5141 560 PRINTS P450 superfamily signature 496 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g5141 560 PRINTS P450 superfamily signature 505 516 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g5141 560 SUPERFAMILY Cytochrome P450 82 559 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g5141 560 Pfam Cytochrome P450 90 551 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g5141 560 Gene3D Cytochrome P450 86 554 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g5141 560 PRINTS E-class P450 group I signature 117 136 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g5141 560 PRINTS E-class P450 group I signature 355 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g5141 560 PRINTS E-class P450 group I signature 495 505 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g5141 560 PRINTS E-class P450 group I signature 505 528 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5141 Psa-Chr5 449173221 449177139 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5141 63 537 Cytochrome P450 AT4G37430 23.506 1.15e-24 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5141 - - gmx:100809563 707.983