Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5116 ATGTTAATGTCTTTCAACATCAACAAGAAAAAGTTCTTGAGAACACTCTTTTCATCTAACAAAAGTTGTGGTTGCCTCAAAATAAAACCCTCTAATGTCCTTGAACCCTCCCTTAAACCTAAAATCTCAATTTACCAAAACCAAAATAAATACCCTAGCAGCGCCACTTCCTCCGCCACCACCGACGACGATGATAAAGTTTTGGCTTCCAGTCCCGTATGTGAAGCCAAAACTATTCATCACAACAACAATACTATTTTAAAATCAGGTACGAAACTCATCGATAGCATTGCAGTTGAGAAGGAATCCAAGGATCCATACGAAGATTTCCGAAACTCCATACTTCAAATGATATTAGAAAGAAAGATCTACGCAGAAAGAGAACTTGAAGTGCTTCTTGAATGTTTTCTTCAGCTTAATGCAAAGTGTCACCACCAAGTTATTGTTGAAGCGTTCATGGAGATATGTGAAGAAATATTCCCTAAGAAGCTTCAAGGTGAAGGTGAAGAGTCTCCAAGGAATAATAATCAAATTTTTGGAAAGAGTTAG 549 0.3734 MLMSFNINKKKFLRTLFSSNKSCGCLKIKPSNVLEPSLKPKISIYQNQNKYPSSATSSATTDDDDKVLASSPVCEAKTIHHNNNTILKSGTKLIDSIAVEKESKDPYEDFRNSILQMILERKIYAERELEVLLECFLQLNAKCHHQVIVEAFMEICEEIFPKKLQGEGEESPRNNNQIFGKS* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5116 182 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 7 171 IPR038933 GO:0045892
Psa5g5116 182 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 7 171 - -
Psa5g5116 182 Pfam Transcriptional repressor, ovate 103 160 IPR006458 -
Psa5g5116 182 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 97 158 IPR006458 -
Psa5g5116 182 ProSiteProfiles OVATE domain profile. 99 158 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5116 Psa-Chr5 448205496 448206044 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Psa5g5116 Ovate 1.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5116 - - mtr:MTR_5g079710 218.394