Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5115 ATGTATGGGAGAAAAGCTTGCCAACTTGTGAAAGAATTTTCAAGTGGAGAAAAGGGCCAGCTCACACCATTTAATAATGACTTGTTTGACCAAGTAATATCAGAGTGCAACCAACATCACCTTGAGCTTCAGGCCTTGATAAGGAAGATGCAGGAAGAAGGTTTGGATGTCCAAACAGCTAGGAATCCTGACCACTATGGAGCCCTCATCCATCTATTTTCTATAGTTCGAAATAAACGTTGTCTAACAGCTTATGTGTATAACCGAGCAGAAACTATACGGAACCTGTTATGGAAGATAGGGCCCGTGATTCCAAAAGAAATTGAAGAGAAGCTTAATCATTGGGAGGAAGAGTATTTCAAGAAGCATTCTGTAGCATTGAGAACTTATATGTCAAAAGCACTGGTTGATTTGACTGTGGATATGGTACCACCAAAAGATCCATACATTCAAGTAAGGGTCCTTGAAGACATAAGAGAAGGCATTGTACTTAGTGATAATAAGAATCCCAATTTCGCCCGCCATTCCATGCACTTTCTGAAGCGAACTGATGCAGAGAAATATATCTCACGGGGCTTAATGGAAGAGCTCACTGGTTGA 600 0.4083 MYGRKACQLVKEFSSGEKGQLTPFNNDLFDQVISECNQHHLELQALIRKMQEEGLDVQTARNPDHYGALIHLFSIVRNKRCLTAYVYNRAETIRNLLWKIGPVIPKEIEEKLNHWEEEYFKKHSVALRTYMSKALVDLTVDMVPPKDPYIQVRVLEDIREGIVLSDNKNPNFARHSMHFLKRTDAEKYISRGLMEELTG* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5115 199 Pfam GINS complex protein 46 116 IPR021151 -
Psa5g5115 199 SUPERFAMILY GINS helical bundle-like 1 146 IPR036224 -
Psa5g5115 199 Coils Coil 33 53 - -
Psa5g5115 199 CDD GINS_A_psf1 3 133 IPR005339 GO:0000811|GO:0006260
Psa5g5115 199 PANTHER PARTNER OF SLD5 1 195 IPR005339 GO:0000811|GO:0006260
Psa5g5115 199 Gene3D - 1 134 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5115 1 199 Core DNA Replication Machinery Family AT1G80190 67.822 4.94e-102 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5115 K10732 - qsu:112021696 327.02