Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5099 ATGGCTTTCAAAACTAACCAAAACGGAAACGAAGAAGAAGAAGAAGAAAAAGCACCATACACAGTAGAACAACAAGAACAAGACGACGATGACGAAGAAGAAGTAGAAGAAGAAGTGTGGGATGATTGGGAAGGAGACGACGGAGATTCAGACTCTGATTTCCTCTGCCTCTTCTGTGATTCCAATCACGATTCCTGTACATCATTGTTCCAACATTGCGCTTCAATTCACCACTTCGATTTTCATGCTCTTAGAAATTCCCTTCAATTGGATTTCTATGCTTCCTTCAAGCTCATTAACTATATTCGCTCAAAGGTGGCAGAGAGCAAATGTTGGAGTTGTGGGTTAGCTTGTCAATCCAAAGATGATTTGCTGAATCACTTGCATGATGTAATTGACTTCAATACTATTACACCATTGTGGGATGATGATAGATATCTAAAACCTTTCATGCAAGATGATTCATTGCTGTACAACTTTGGTGACTTTGAAGAAGGTGAAGATGAACAAACTTCAATCATGGATGAAGATCTTGTGACGGATTTGAAAAACGCTCTAGAAACAAAAGGTGTTGATCAAGATACCGTGAAAAATTTGGTAGTTAATGACCATGCATATGATGATTGTAGAAGAAAGGAGACAGCTTTTGTTTCAGATGAGCATTCAAACTTGCCCAGCTCTTCGGCTAAGGAGCTTGTTAATGGGAAGGACTCGAGAGGATGTGTTTCATCTATTGATAAGGATCCAGAAGAAGGGTCTTTGATGGGTAATCCTCCTAGTCACATTGCAAAGCATATTAAGAAGGTTAATGAAAGTTATTTTGGGTCTTACAGCTCATTTGGCATCCATCGAGAGATGTTAAGTGATAAGGCTAGAATGGATGCATATGGTCAAGCAATTTTGAAGAATCCCTCTCTGCTAAATGGTGCTGTCGTTATGGATGTAGGTTGTGGAACCGGCATCCTCAGCCTTTTTGCAGCTCAGGCGGGGGCTTCGAGGGTCATTGCAGTTGAGGCTAGTGCGAAGATGGCAGCAGTGGCATCTCGGGTTGCAAAAGATAACAGTCTCTTGTTGAGTAAAAACGAAACTAGAGTCAATGGCAACCAAAAAGGAGTAGTAGAAGTGGTTCATGGCATGGTTGAAGAAATTGACAAAATTGTTGAACTTCAACCTCACAGTGTTGATGTATTGTTAAGTGAATGGATGGGATATTGCCTGCTGTATGAATCCATGCTTGGTTCAGTGCTTTATGCACGTGACCGGTATCTGAAGCCTGGGGGTGCCATTCTTCCCGACACAGCAACTATTTTTGTTGCAGGATTTGGAAAAGGAGGTACAAGTCTTCCATTTTGGGAGAACGTGTGTGATTTTGACATGTCTAGTATTGGGGAGGAGCTTGTTACAGATGCTGCCCGATATCCTATAGTTGATGTCATAGACCACCAAGATTTAGTTACCAGTTCTACCATTCTTCAGACCTTTGACTTGGCTACCATGAAGCCCGATGAAGTGGATTTCACCGCAACAGCTTCTTTGGAACCAAATTCGAGCAGTTCAGAAAACGGAAAAACACATTTGAATTCTAAAACATGTCGTTGGTGTTATGGCGTTGTCCTATGGTTTGATACTGGATTTACATCTAGATTCTGCCGGGAAACACCGGCTGTGTTGTCAACATCCCCCTACACTCCAAAAACACACTGGTCACAAACAATCTTAACTTTCCGGGAACCTATTGCCATTGGATCGGGTGAAGATAATGCGATAAAACCAGAAACTATTGGCACTGAAGTCTACCCTGCTGCGAAGATTGATCTGCGTGTCAGCATTGTCCGCTCTACCGAGCATCGCAGCATTGACATTTCCATGGAAGCTGCTGGCGTAAGTTCTGATGGCCGGAGACGCAGTTGGCCTGCTCAACTTATTTCTCTTCAGTAG 1938 0.4252 MAFKTNQNGNEEEEEEKAPYTVEQQEQDDDDEEEVEEEVWDDWEGDDGDSDSDFLCLFCDSNHDSCTSLFQHCASIHHFDFHALRNSLQLDFYASFKLINYIRSKVAESKCWSCGLACQSKDDLLNHLHDVIDFNTITPLWDDDRYLKPFMQDDSLLYNFGDFEEGEDEQTSIMDEDLVTDLKNALETKGVDQDTVKNLVVNDHAYDDCRRKETAFVSDEHSNLPSSSAKELVNGKDSRGCVSSIDKDPEEGSLMGNPPSHIAKHIKKVNESYFGSYSSFGIHREMLSDKARMDAYGQAILKNPSLLNGAVVMDVGCGTGILSLFAAQAGASRVIAVEASAKMAAVASRVAKDNSLLLSKNETRVNGNQKGVVEVVHGMVEEIDKIVELQPHSVDVLLSEWMGYCLLYESMLGSVLYARDRYLKPGGAILPDTATIFVAGFGKGGTSLPFWENVCDFDMSSIGEELVTDAARYPIVDVIDHQDLVTSSTILQTFDLATMKPDEVDFTATASLEPNSSSSENGKTHLNSKTCRWCYGVVLWFDTGFTSRFCRETPAVLSTSPYTPKTHWSQTILTFREPIAIGSGEDNAIKPETIGTEVYPAAKIDLRVSIVRSTEHRSIDISMEAAGVSSDGRRRSWPAQLISLQ* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5099 645 CDD AdoMet_MTases 312 430 - -
Psa5g5099 645 Gene3D Vaccinia Virus protein VP39 262 431 IPR029063 -
Psa5g5099 645 Pfam C2H2 type zinc-finger (2 copies) 56 130 IPR041661 -
Psa5g5099 645 Gene3D - 433 637 - -
Psa5g5099 645 MobiDBLite consensus disorder prediction 8 24 - -
Psa5g5099 645 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 3-RELATED 26 642 - -
Psa5g5099 645 SUPERFAMILY beta-beta-alpha zinc fingers 36 170 IPR036236 -
Psa5g5099 645 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 26 642 IPR025799 GO:0016274|GO:0018216
Psa5g5099 645 MobiDBLite consensus disorder prediction 1 43 - -
Psa5g5099 645 MobiDBLite consensus disorder prediction 25 43 - -
Psa5g5099 645 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 276 585 IPR029063 -
Psa5g5099 645 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 270 599 IPR025799 GO:0016274|GO:0018216
Psa5g5099 645 Pfam Methyltransferase domain 312 427 IPR041698 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5099 Psa-Chr5 447101500 447105657 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5099 28 644 C2H2 Transcription Factor Family AT3G12270 54.899 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5099 K11436 - gmx:100778113 863.218