Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5073 ATGCGGTTACGGTTGCGGGTGTTGCGAATGCGGTCATTGTGCTTGTTGCGACATTGCGGCCGTTGCGGTGTGAATTTTTATAGGATGGAAGCCCTTGCTGTTACAGTCTTGGAAAAGTTGAGCTCTTCAGTTTACAAAGAGCTGGGAATCATTTGGAATCTCAAAGAGGATATCGAAAAAATGAAGAACACAATATCTTTGATAAAATCCGTGCTCCTTGATGCAGAGACCAAAACCAATAATCATCAAGTTAGTAATTGGTTGGAGGAGCTGAAAGATGTACTTTATGATGCAGATGATTTACTAGATGATTTTTCCATTGAAGATTTGAAAGGAAAAGTGATGGATAGAAACACAAAAGTAAAACAGGGAGCAAAGACAAACTTACTCTTTTTTGGGATTGGAGGATTAGGTAAGACCGCACTTGCTCAGCTGGTCTACAATGATAATGATGTTCAGAAGCATTTTGAGCTAAAAATGTGGGTGTATGTTTCTGATGAATTTGATATGAAGAAAATAGCTCAGGAGATCATTGGGAATGAAAAGAATAGTCTGATGGAGCAAGTGCAACAACAACTTAGAAACAAAATTCAAGGGAAAAAGTTTTTGCTTGTGTTAGATGACATGTGGAACGAGGATCGTGAAATTTGGCTTAAGTTGAAGAGCTTGTTCGTGGAAGGAGGAAGGGGAAGCATGATAATTGTTACAACGCGTAGTCAGACTGTGGCAAGAATAGCGGGCACACATCCACCTCTTTTGTTAGAGGGTCTGGATTATCAAAAATCTATGAAGCTGTTCTCCCGAGTCGCTTTCGGCGAGTTAAAAGAACAAAATGATTTGGAATTGTTAGCTATAGGAAGGGACATTGTTAAAAAATGTGCTGGCATTCCCCTTGCTATAAGGACTATTGGAAGCCTTTTGTTTTCTCGAAATTTGGGGAGGACTGATTGGCAATATTTCAAGGATGTTGAGTTTTCGAAGATAGATCAACACAAGGACAAAATATTTTCAATCCTTAAACTGAGAGAAGAAGCAATCAATGTAAACCGAACGCGTTATTTGTCGTCTCGTTCTGCATTACAGTTCGGATCACAATCACCATCTTCCTACAAGTTAAGGACATTTCATTTGCATCCACAAATGAATGCAGGCAATTATATGGATCAATCGTATGTTCTTTCCTTTTCACGACTAAAGATGTTACGTGTGTTGACACTTTCTGGGCTGAATAATGTTGCGATCCCAAATAGTATTGAAGAGATGAAGCATTTAAGATATATTGATCTATCACTGAATATTGCACTTAAAGATCTTCCGCCGGGCATTACTAGCCTGCAGAACTTGCAAACTCTAAAACTTTCTGAATGTTATAATCTCGAAATATTACCAGAAAATATTAATAAAAGTCTCAGGCATCTTGAATTGAATGGTTGTGAGAGATTGACATGTATGCCACAAGGGTTGGGACAGTTGACCAATCTTCAAACACTAACAAATTTTGTATGTGACAAAGGAAGTACAGGTGTTAATGAGCTGATTGACCTAAACAACCTTAGAGGGAGACTAGAAATCAAAGGGTTGGATTCACTTCGAAATAGTGCTGCAGAGATTGAATATGCAAAAGTACTTATTGAGAAGAAACACCTTCAACAATTGGAATTGCGGTGGACTTACGATGATGATTTCAATCCATGGCCATCACAGCCCAAAAGGGCCGAGTTACGGTTGGAAGATGAGATGGTTTTAGAAGCTCTGCAGCCACACCACTCACTTCAAAAGCTAGTTATAGATGGATTTTGTGGCAAAAGGTTACCGGACTGGATAGGGACTCTCTCGTCGCTCTTGACTGTTGAGATCCACAATTGCACGTTTTTGACATCACTACCTGAAGCAATGTGTAACCTTGTCTCTTTGCAAAAGCTTTGCATGTATAATTGCATACCATTGGAGAAAATTTATGCAAAACCATATGGTCAAGAATGGCCAAAAATTTCTCACATTCGAGAAGTTGAGATCCTTCCTATGAGACCATCATTACTCAAGTATTTTACTTGA 2055 0.3898 MRLRLRVLRMRSLCLLRHCGRCGVNFYRMEALAVTVLEKLSSSVYKELGIIWNLKEDIEKMKNTISLIKSVLLDAETKTNNHQVSNWLEELKDVLYDADDLLDDFSIEDLKGKVMDRNTKVKQGAKTNLLFFGIGGLGKTALAQLVYNDNDVQKHFELKMWVYVSDEFDMKKIAQEIIGNEKNSLMEQVQQQLRNKIQGKKFLLVLDDMWNEDREIWLKLKSLFVEGGRGSMIIVTTRSQTVARIAGTHPPLLLEGLDYQKSMKLFSRVAFGELKEQNDLELLAIGRDIVKKCAGIPLAIRTIGSLLFSRNLGRTDWQYFKDVEFSKIDQHKDKIFSILKLREEAINVNRTRYLSSRSALQFGSQSPSSYKLRTFHLHPQMNAGNYMDQSYVLSFSRLKMLRVLTLSGLNNVAIPNSIEEMKHLRYIDLSLNIALKDLPPGITSLQNLQTLKLSECYNLEILPENINKSLRHLELNGCERLTCMPQGLGQLTNLQTLTNFVCDKGSTGVNELIDLNNLRGRLEIKGLDSLRNSAAEIEYAKVLIEKKHLQQLELRWTYDDDFNPWPSQPKRAELRLEDEMVLEALQPHHSLQKLVIDGFCGKRLPDWIGTLSSLLTVEIHNCTFLTSLPEAMCNLVSLQKLCMYNCIPLEKIYAKPYGQEWPKISHIREVEILPMRPSLLKYFT* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5073 684 PRINTS Disease resistance protein signature 128 143 - -
Psa5g5073 684 PRINTS Disease resistance protein signature 196 210 - -
Psa5g5073 684 PRINTS Disease resistance protein signature 293 307 - -
Psa5g5073 684 PRINTS Disease resistance protein signature 443 459 - -
Psa5g5073 684 PANTHER OS10G0130600 PROTEIN 132 341 - -
Psa5g5073 684 PANTHER OS10G0130600 PROTEIN 371 645 - -
Psa5g5073 684 PANTHER OS10G0130600 PROTEIN 35 111 - -
Psa5g5073 684 Pfam NB-ARC domain 110 323 IPR002182 GO:0043531
Psa5g5073 684 Gene3D Ribonuclease Inhibitor 367 672 IPR032675 -
Psa5g5073 684 Gene3D - 99 249 IPR027417 -
Psa5g5073 684 Gene3D - 256 342 IPR042197 -
Psa5g5073 684 SUPERFAMILY L domain-like 367 653 - -
Psa5g5073 684 PANTHER DISEASE RESISTANCE PROTEIN RP 132 341 IPR044974 GO:0006952
Psa5g5073 684 PANTHER DISEASE RESISTANCE PROTEIN RP 371 645 IPR044974 GO:0006952
Psa5g5073 684 PANTHER DISEASE RESISTANCE PROTEIN RP 35 111 IPR044974 GO:0006952
Psa5g5073 684 Pfam Rx N-terminal domain 35 119 IPR041118 -
Psa5g5073 684 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 345 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5073 Psa-Chr5 446053348 446057314 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5073 132 310 WRKY Transcription Factor Family AT5G45050 26.064 1.88e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5073 - - mtr:MTR_3g015500 371.318