LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa5g5072	ATGGCACAGTTCCATGTTTTGGCTGTTGATGATAGTGTTATTGATAGAATGTTGATTGAAAGACTCCTCAAAACCTCTTCATTTCATGTTACTGTGGTTGATTCTGGTAGTAAGGCTTTGAAGTTTCTTGGTTTGGTTGAAGATGAAGTGAGGAATGAAAAGGTTTCATCTATTGCTACGGAAACAGATCAGGTTGTGGAAGTGAATCTGATTATAACTGATTATTGTATGCCAGGAATGACAGGTTATGATCTGCTGAGAAAAATCAAGGAATCTAATTCTCTTAAAGACATACCAGTTGTGATTATGTCATCGGAGAATGTTCCATCAAGAATCAACAGATGTTTAGAGGAAGGAGCTGAAGAGTTTTTTCTGAAACCAGTTCAACAATCAGATGTAAACAAGCTGAAACCACATTTGTTGAAGACAAAACTTAAGAATGTTGATGAACAAACCAACAACATAGGAAGGATGCAGAACAATAAAAGATGTTACATTCAAAATTAA	507	0.3531	MAQFHVLAVDDSVIDRMLIERLLKTSSFHVTVVDSGSKALKFLGLVEDEVRNEKVSSIATETDQVVEVNLIITDYCMPGMTGYDLLRKIKESNSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQQSDVNKLKPHLLKTKLKNVDEQTNNIGRMQNNKRCYIQN*	169

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa5g5072	168	CDD	REC_typeA_ARR	6	136	-	-
	Psa5g5072	168	Pfam	Response regulator receiver domain	6	133	IPR001789	GO:0000160
	Psa5g5072	168	Gene3D	-	5	163	-	-
	Psa5g5072	168	PANTHER	TWO-COMPONENT RESPONSE REGULATOR	3	151	IPR045279	GO:0009736
	Psa5g5072	168	SUPERFAMILY	CheY-like	3	136	IPR011006	-
	Psa5g5072	168	SMART	REC_2	4	140	IPR001789	GO:0000160
	Psa5g5072	168	ProSiteProfiles	Response regulatory domain profile.	5	141	IPR001789	GO:0000160
	Psa5g5072	168	PANTHER	RESPONSE REGULATOR ARR8, PUTATIVE-RELATED	3	151	-	-
	Psa5g5072	168	Coils	Coil	141	161	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa5g5072	Psa-Chr5	446033841	446035898	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa5g5072	2	147	Response Regulator Gene Family	AT3G57040	72.789	2.36e-73	218

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	Others	Psa5g5072		Response_reg	1.2e-19	CL0304

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa5g5072	K14492		-	gmx:100818762	243.047