Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5029 ATGGCGAATATTGTTGAAGAAAAACTCATCTCAGCTTCTGTGAAAGTGTTGTTACAAAAGCTCTTTTCTCCAGAATTCATCCGCTACTACCAGAGTTCCAAGCTTGACGATTTACTCTTGATAAACCTGAAGACAACACTGTTCAATCTTCAATCTGTACTTGTTCATCATCATCATCATGATGAGGAGAAACAGATCAACCATCCTATTTTCAAGGAATGGTTCGACATCGTCAGATACGTTATCTTTCAACTTCACACTTTGCTTGACCAAATCAACGACTCTGAAACCCTAACTCCTTCTACTAAGGTGCGTGACTTTTTCCCTTCCAGTTTCAAACAGTTTCGCGAGCTCATCAACTATGAAATGCAAAGATTAATTGAAAGGTTACAATACTTGATTTTGAGACAACAACAAGCTGGATTGGGGTTTTCTAATTACACTAATGCTTTCCATGGAACTCCTACAAGTTCTATTTTGGAGGATGAATCTTCTGTTATTTATGGACGAGAAAGTGATATGAACAAGCTCAAAGATCTTTTGTTGTTTAGTGATAGTGATGGTGATAGTAAAATAAGAATGATTTCCATTGTAGGTATGGGAGGGATTGGGAAAACAACTCTTGCTAAACACCTTTACAATGATCCACAAGTTATGGACAAATTTGAGTTCAAAGTGTGGATATGTATCTCCAAAGATTTTGATGTTTATAGAGTTTTTAAAACCATTCTTGAGTCTATCACTTTGCAATCAATCAGTAGTGATAACTTGAATTCTCAAACGGTTGAATTTGACAATACAAGAGGAAGTTACACTAGTGGGATGACTACCTATTACCCGAATCTTCTATTTGTATCATTGAAGAAAATTTTAACTACTTCAAGCTTTTTGCTAGTATTGGATGATGTGTGGGATACAAAATCGGTTGATTGGATATCTTTCATGGACATCTTTAATGCTGTGGAAACAAATAAACTTGGGACTCTTCTTCACTCCAAATTGTCCCCGGATGATTGGAATTTTGTGCTAGAAAGTAACATTTTGGGCTCGTCAAATCAGGAGGTGCGTGTTGCTCTAGAGTCGAGCTACCATTCTCTTTCAACTCCTTTAAAACGATGCTTTGCATATTGCTCTATTTTTCCGAAGAAATCCATCTTAGAAAAAAAATTGGTAGTTCAGTTGTGGATTGCAGAAGACTTGGTAGAGTTGTACCCAGGTCAAGAAAGTTTGGAAGAAGTTGGAGAAGAGTACTTCGATGTACTAGTGTCAAGGTCGTTGATACAACGACGATCTATCAGTGATGCGGAAGCAAACTTTGAAATGCATAACGTCATCCATGATTTAACTACAATGGTTTCATCTCCATATTGTAAGAGGTTGGACGAACATAACCTACATGAAAGTGTACACCATTTGTCATACAATAGAGGCCTATATGACTCATTTAATAAATTTGATGAATTGTCTGGATTAAAACGGCTACGCACCTTTCTAGCATTACCATTACAAGAACAAATGCCTTGTCATTTGCTATCGAATAAGGTAGTACATGAGTTGTTGCCAACAATGAAACAATTACGGGTGTTGTCCTTGTCAAACTACAAAAGTATCACTGAAGTTCCCAATTCTATTGGAAGTTTGTTATACTTGCGGTACTTAAATTTTTCTCACACTAAGATTGAAAGGCTACCTTCTGAAACATGCAAGCTTTACAATTTGCAGTTCTTGTTGTTGGCTGGCTGTGAAAAGCTCACTGAATTGCCGGAAGACATAGGAAAATTGGTTAATCTGCGCCACCTTGACGTTAGTGGCACCGCATTGAGGGAGATGCCTGTACAGATAGCTAAACTAGAAAATCTCCAATTTTTGTCAGACTTTGTTGTCAGCAAACATAATGATGGGCTGAAGGTTGCAGAGTTGGGAAAATTTCCCCACCTACATGGAAAACTTTCCATCTCACAGCTACAAAATATTAATGACCCCTTTGAAGTAGATCAAGCGAATATAAAGATGAAAGAACAAATAGATGAATTAGCTTTGGAATGGGATTATGGTAGTACTTTTCCAGATTCACAAATTAAAAGTGTTGTGCTTGAACATTTGCAACCCTCAACCAATTTGAAAAGTCTCACTATCAAAGGTTATGGTGGAATCAACTTTCCAAATTGGTTGGGTGATTTTTTGTTTAGCAACATGGTGTATTTGAAGATCTCGAATTGTGATGAATGTTTATGGCTTCCACCCCTTGGACAGTTGGTTAATCTGAAAAAACTCATTATCGAAGGGATGCAATCAATACAAACAATTGGTACTGAGTTCTATGGAAGTGATAACTCTTTAATTCAACCATTTCCCTCCCTGGAGATTCTACATTTTGTGGATATGCATGAGTTGGAAGAATGGAACTTGACTAGTGGTACGACTACAAAGTTTCCTAGTCTAAAAACTCTGTCACTAAGTAAGTGTCCGAAATTGATAGTAGGAAATATACCTGAAAAATTTCCTTCCTTAATTGAGCTTGAGTTAAGAGAATGTGCTCTACAAGTGCAGTCAAAGCCATCATCAAATAATGTATTAAGGCAATTGATGTTCCCTCTAAATTCTCTTAGACAGTTGACTGTAGATGGCTTGTCGTCTTTGATGTCTTTCCCAACAGACGGTCTACCAAAGACATTGAAATCGCTCATAATCAATAATTGTGCTCTCCCTGTCCTTAAGAGTCTATTTATCGAGGGTTGTAAAAATCTGAAATCAATATTAATCGCTGAAGATGCATCGCAAAAGAGTCTTTCATTTCTTAGAAGCATCAAAATATGGGACTGTAATGTACTCGAGTCATTTCCCTTAGGTGGATTGGCCACTCCAAACCTCGTTTATTTTGCATTGTGGAAGTGTGAGAAGCTTCCTTCACTACCAGAAGCAATGCAGACTCTAGCTAACCTTCAAGAAATGGAAATTGATAATCTACCAAATCTTCAATCTTTTCTCATATTCAATTTACCTAGCAGTTTACAAGAACTGACTGTTGGTTCTGTTGGAGGGGTTATGTCACCTTTGAATCATCTCACCTGTCTTTCAGTGTTGCGGATTAACAGCAATGATACAGAAAATTTGCTAATGGGGCTATTTCTACCTGCATCACTTGTGAAGTTATGCATTTGTGGTCTAATTGATACAAGCATCGATGGAATGTCACTTCAACATCTCACTTCTCTCCAAAACCTTGAGATTATTAATGCTCCCAAACTCAAGTCATTGCCAAAAAAAGGATTTCCTTCCTCTGTTTCAGTACTAAGCGTGACTCGCTGTCCATTATTGGAAGCAAGTTTGCGGAGGAAGAGAGGGAACGAATGGCGTAAGATTGCTCACATTCCTGCCATAATTATAAATGACGAATTGATCACATAA 3408 0.375 MANIVEEKLISASVKVLLQKLFSPEFIRYYQSSKLDDLLLINLKTTLFNLQSVLVHHHHHDEEKQINHPIFKEWFDIVRYVIFQLHTLLDQINDSETLTPSTKVRDFFPSSFKQFRELINYEMQRLIERLQYLILRQQQAGLGFSNYTNAFHGTPTSSILEDESSVIYGRESDMNKLKDLLLFSDSDGDSKIRMISIVGMGGIGKTTLAKHLYNDPQVMDKFEFKVWICISKDFDVYRVFKTILESITLQSISSDNLNSQTVEFDNTRGSYTSGMTTYYPNLLFVSLKKILTTSSFLLVLDDVWDTKSVDWISFMDIFNAVETNKLGTLLHSKLSPDDWNFVLESNILGSSNQEVRVALESSYHSLSTPLKRCFAYCSIFPKKSILEKKLVVQLWIAEDLVELYPGQESLEEVGEEYFDVLVSRSLIQRRSISDAEANFEMHNVIHDLTTMVSSPYCKRLDEHNLHESVHHLSYNRGLYDSFNKFDELSGLKRLRTFLALPLQEQMPCHLLSNKVVHELLPTMKQLRVLSLSNYKSITEVPNSIGSLLYLRYLNFSHTKIERLPSETCKLYNLQFLLLAGCEKLTELPEDIGKLVNLRHLDVSGTALREMPVQIAKLENLQFLSDFVVSKHNDGLKVAELGKFPHLHGKLSISQLQNINDPFEVDQANIKMKEQIDELALEWDYGSTFPDSQIKSVVLEHLQPSTNLKSLTIKGYGGINFPNWLGDFLFSNMVYLKISNCDECLWLPPLGQLVNLKKLIIEGMQSIQTIGTEFYGSDNSLIQPFPSLEILHFVDMHELEEWNLTSGTTTKFPSLKTLSLSKCPKLIVGNIPEKFPSLIELELRECALQVQSKPSSNNVLRQLMFPLNSLRQLTVDGLSSLMSFPTDGLPKTLKSLIINNCALPVLKSLFIEGCKNLKSILIAEDASQKSLSFLRSIKIWDCNVLESFPLGGLATPNLVYFALWKCEKLPSLPEAMQTLANLQEMEIDNLPNLQSFLIFNLPSSLQELTVGSVGGVMSPLNHLTCLSVLRINSNDTENLLMGLFLPASLVKLCICGLIDTSIDGMSLQHLTSLQNLEIINAPKLKSLPKKGFPSSVSVLSVTRCPLLEASLRRKRGNEWRKIAHIPAIIINDELIT* 1136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5029 1135 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 377 IPR027417 -
Psa5g5029 1135 Gene3D Ribonuclease Inhibitor 827 923 IPR032675 -
Psa5g5029 1135 Gene3D Ribonuclease Inhibitor 924 1013 IPR032675 -
Psa5g5029 1135 Gene3D - 146 333 IPR027417 -
Psa5g5029 1135 SUPERFAMILY L domain-like 468 921 - -
Psa5g5029 1135 Pfam NB-ARC domain 171 313 IPR002182 GO:0043531
Psa5g5029 1135 PANTHER DISEASE RESISTANCE PROTEIN RP 34 308 IPR044974 GO:0006952
Psa5g5029 1135 PANTHER DISEASE RESISTANCE PROTEIN RP 328 836 IPR044974 GO:0006952
Psa5g5029 1135 PRINTS Disease resistance protein signature 194 209 - -
Psa5g5029 1135 PRINTS Disease resistance protein signature 809 825 - -
Psa5g5029 1135 PANTHER OS05G0414200 PROTEIN 34 308 - -
Psa5g5029 1135 PANTHER OS05G0414200 PROTEIN 328 836 - -
Psa5g5029 1135 SUPERFAMILY L domain-like 864 1108 - -
Psa5g5029 1135 Gene3D - 357 451 IPR036388 -
Psa5g5029 1135 Gene3D Ribonuclease Inhibitor 455 826 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5029 Psa-Chr5 443928432 443932160 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5029 508 632 WRKY Transcription Factor Family AT4G12020 33.333 2.73e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5029 - - mtr:MTR_0603s0010 1080.09