Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5027 ATGGAGAACCATGATAAGGTGCTAATGCTAATCGTGTGTACTTTGTTCTTTTTCTCCATGCCCACTTTCTCTAAACAGAACACATTTACTATTATTGCTCCAAATCAGTTTATCCAATATCATGAAACAATTGTTTCTGCAGCTGGAACCTTTGAAGCAGGATTTTTCAACTTTGGAGATCCACAGCGCCAATACTTTGGGATATGGTACAAGCGCATATCACCTAGGACTATTGTGTGGGTTGCCAATAGAGACACCCCTGTACAAAACTCAACAGGATTGCTGAAACTCAATGATCAGGGAAATCTTGTTATTCTTGATGACTCTAAAGGCGCTGTCTGGTCCTCCAATTCATCAAGAATTGTGGTGAAACCAGCTGTGGTGCAGTTGTTGGATTCTGGAAACCTTGTTGTGAAAGATGCAAACAGCACTGGTAACTTTTTTTGGGAAAGTTTTGATTATCCTGGTAACACTTTCCTTGCTGGAATGAAGCTGAAAAGTAATTTAGTTACTGGTCCATATAGATATCTCACATCTTGGAGAAACCCTGAAGATCCTGCTGAAGGTGCGTATTCATATAGGATAGATACACATGGTTTACCTCAATTGGTTAATGCTAAGGGAGCAAGATTTCTGTATAGAGGAGGCTCATGGAATGGATTTCTTTTTACTGGTGTTTCTTGGCAAAGAATGCATAGAATCTTGAATTTCTCAGTAGTGTTCACTGACAAAGAAATCTCTTATCAATATGAAACTTTGATCAGTTCAGTTATTACTAGAGTGGTTCTAGACTCATATGGAATCTCACAACGTTTTCAATGGTCAGATATGACACAAAATTGGGAGGCTATAGCTACTCGTCCTGCAGACCAGTGTGATGATTATGCCTTTTGTGGTATCAACTCTAATTGCAATATTGATGACTTTCCAATATGTGAATGCTTGGAAGGTTTCATGCCAAAATTTCAACCAAAATGGAAGTCATCAAATTGGTCTGGTGGGTGTGTTAGGAACATACATTTAAATTGTCTCCATGGAGATGGATTTTTGAAGTACCCAAACATGAAGTTGCCAGATACGTCATCGTCGTGGTTTGACAAGAGCTTGAGCCTTGAGGAATGCAAGATAATGTGTTTGAAAAACTGCTCTTGTACTGCATATGCAAATTTAGATATCAGAGATGGTGGGAGTGGCTGCTTACATTGGTTTGACAACATTGTCGACATGAGAAAACATCCAGACCAAGGGCAAGACATTTACATTCGGCTTGCATCTTCAGAACTTGATCATAAAAAGAATAAGAGGAACTTGAAGCTTGCTGGGACTCTTGCAGGGGTTATTGCATCAATTATAGGACTATCCGTTCTTGTATTGGTCACATCAGCATATAGAAAGAAGCTTGGGTATATAAAAAAGTTATTTCACCGGAAGCACAAAACGGAGAAGGAAGATGGTGACTTGGCTACAATATTTGATTTTTCAACCATCACCAATGCAACAAATAACTTCTCTGACAGAAACAAGCTAGGAGAAGGTGGTTTCGGAACAGTGTACAAGGGCATATTGGTCGATGGCCAAGAGATTGCTGTAAAGAGGCTTTCTAAAACATCAGGACAAGGAACTGAGGAGTTCAAAAATGAAGTGAAGTTGATGGCAACACTTCAACATCGTAATCTTGTAAAACTTCTTGGTTGTTCTATTCAACAAGATGAAAAGCTGTTGATCTATGAGTTCATGCCCAACAAAAGCTTGGATTGCTTTATTTTTGATACTATGCGAAGCAAATTACTAAATTGGACCAAGCGCTTGGAAATTATTGATGGGATTGCTCGAGGGCTGCTGTATCTCCACCAAGATTCTACACTAAGAATCATACATAGAGATCTCAAGACAAGCAATATTCTTCTTGATATTGATATGATCCCAAAGATATCAGATTTTGGTTTAGCCAGATCATTTACGGGAGATCAAGCTGAGACTAATACAAATAGAGTGATGGGAACATATGGATATATGCCTCCAGAATATGCAGTGCATGGATATTTCTCAATAAAATCTGATGTTTTCAGCTTTGGAGTTGTTGTACTTGAGATAATTAGTGGCAGGAAGAATCGCGGATTTTGTGACCCTATACACCATCTAAACCTTCTTGGTCATGCATGGAGACTATGGATTGAAGAAAGGCTAGAAGAGTTAATAGCTGATATATCATATGATGAAGCCATATGTTCAGAAATAATAAGATTTATTCATGTGGGTCTATTGTGTGTACAACAGAAACCAGAAAACAGACCTAACATGTCATCTGTGGTTTTTATGTTAAAGGGTGAAAAGCTACTCCCAAAACCTAGCGAACCTGGGTTCTACGCAGGAAAAGATAATACAAATAGCACCGGATCTTCTTCAAAAGGTTGTTCACTAAACGAAGCTTCAATCTCATTGTTAGAGGCTCGATAG 2457 0.3867 MENHDKVLMLIVCTLFFFSMPTFSKQNTFTIIAPNQFIQYHETIVSAAGTFEAGFFNFGDPQRQYFGIWYKRISPRTIVWVANRDTPVQNSTGLLKLNDQGNLVILDDSKGAVWSSNSSRIVVKPAVVQLLDSGNLVVKDANSTGNFFWESFDYPGNTFLAGMKLKSNLVTGPYRYLTSWRNPEDPAEGAYSYRIDTHGLPQLVNAKGARFLYRGGSWNGFLFTGVSWQRMHRILNFSVVFTDKEISYQYETLISSVITRVVLDSYGISQRFQWSDMTQNWEAIATRPADQCDDYAFCGINSNCNIDDFPICECLEGFMPKFQPKWKSSNWSGGCVRNIHLNCLHGDGFLKYPNMKLPDTSSSWFDKSLSLEECKIMCLKNCSCTAYANLDIRDGGSGCLHWFDNIVDMRKHPDQGQDIYIRLASSELDHKKNKRNLKLAGTLAGVIASIIGLSVLVLVTSAYRKKLGYIKKLFHRKHKTEKEDGDLATIFDFSTITNATNNFSDRNKLGEGGFGTVYKGILVDGQEIAVKRLSKTSGQGTEEFKNEVKLMATLQHRNLVKLLGCSIQQDEKLLIYEFMPNKSLDCFIFDTMRSKLLNWTKRLEIIDGIARGLLYLHQDSTLRIIHRDLKTSNILLDIDMIPKISDFGLARSFTGDQAETNTNRVMGTYGYMPPEYAVHGYFSIKSDVFSFGVVVLEIISGRKNRGFCDPIHHLNLLGHAWRLWIEERLEELIADISYDEAICSEIIRFIHVGLLCVQQKPENRPNMSSVVFMLKGEKLLPKPSEPGFYAGKDNTNSTGSSSKGCSLNEASISLLEAR* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5027 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 186 IPR036426 -
Psa5g5027 818 Gene3D - 25 152 IPR036426 -
Psa5g5027 818 SMART serkin_6 503 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g5027 818 CDD B_lectin 42 155 IPR001480 -
Psa5g5027 818 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 818 - -
Psa5g5027 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Psa5g5027 818 Pfam PAN-like domain 343 409 IPR003609 -
Psa5g5027 818 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 20 818 - -
Psa5g5027 818 ProSiteProfiles PAN/Apple domain profile. 343 424 IPR003609 -
Psa5g5027 818 SMART blect_4 35 155 IPR001480 -
Psa5g5027 818 SMART ntp_6 344 423 IPR003609 -
Psa5g5027 818 ProSiteProfiles Protein kinase domain profile. 503 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g5027 818 CDD STKc_IRAK 509 776 - -
Psa5g5027 818 Gene3D Phosphorylase Kinase; domain 1 475 578 - -
Psa5g5027 818 Pfam S-locus glycoprotein domain 213 322 IPR000858 GO:0048544
Psa5g5027 818 PIRSF SRK 2 818 IPR024171 GO:0004674
Psa5g5027 818 Pfam Protein tyrosine and serine/threonine kinase 507 771 IPR001245 GO:0004672|GO:0006468
Psa5g5027 818 Gene3D Hepatocyte Growth Factor 340 425 - -
Psa5g5027 818 CDD PAN_AP_plant 340 424 - -
Psa5g5027 818 ProSitePatterns Protein kinases ATP-binding region signature. 509 531 IPR017441 GO:0005524
Psa5g5027 818 Pfam D-mannose binding lectin 77 181 IPR001480 -
Psa5g5027 818 SUPERFAMILY Protein kinase-like (PK-like) 488 774 IPR011009 -
Psa5g5027 818 Gene3D Transferase(Phosphotransferase) domain 1 579 781 - -
Psa5g5027 818 ProSiteProfiles Bulb-type lectin domain profile. 29 151 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5027 Psa-Chr5 443764006 443767811 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5027 471 818 Receptor kinase-like Gene Family AT4G23140 52.732 1.92e-118 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa5g5027 PK_Tyr_Ser-Thr 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5027 - - gmx:100819820 1183.7