Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5026 ATGCAAATATGCAAGGTTCTCATGCTAATGCTTCACACTACTTTCTTCTTTTTTATTATTCCCACTTTATCTATACAATATGAAACTTTGACTACTATTACACCAAATGATTCTATCCAAGGTAATGAGACTTTGGTATCTTCTGCTGGAACTTTTGAAGCTGGATTCTTCAACTTTGCAGATTCACAACTCCAATACTTTGGTATATGGTACAAAACCATATCACCTAGAACCTATGTTTGGATTGCCAATCGAGATTCTCCGATACAAAACTCAACACCAATTCTGAAACTAACATATCAAGGAACTCTTATTATTGTTGATGATTCTGGAAGGATTGTATGGTCCTCCAATGCATCAACAATCACGGAGAAACCAGTATTGAAACCAGTCTTGTCGCTTTTAGACTCAGGAAACCTTGTTGTGAAAGATGGAGAGAAGATTTTGTGGGAGAGTTTTGATTACCCTGGTGACACTTTTCTTGCAGGAATGAAACTTAAGACAGATTTACTAAATGGTCATTACAGGTCTCTAACATCTTGGAAAAGTATTGAAGATCCTTCTCTTGGTGAGTTTTCTTATCACATAGATGTTCATGGATTTCCTCAACTAGTTACTACAAAAGGAAAAGTTTTATTTAGTAGAGGTGGATCATGGAATGGTTATGCTTTTGGTGGAGTTTCATGGCTAAGGAATCTTAAATTATTCAAATTTTCTTTAGTATTCAATGATAAAGAAGTTTCTTATGAGTATGAAACTTTGAAAAATGGAACTATTACTAGATTATGGCTTAATCCGTCAGGTTTTGCTCAAAGACTGGTATGGTCAGATAGAGAAGGATATTGGGAGATTATATCGACTCGTCCAATGGATCAGTGTGAATATTATTCAAGCTGTGATGCTAATTCTATTTGCAATATTACAAACTCTCCAAGAACATGTCAATGCTTGGAAGGTTTTGTACCAAAGTATTACGAAAAGTGGAATTCTTTAGATTGGTCTGGTGGATGTGTTAGAAGAAAAAGGTTAAATTGCACCGGAGATTGGTTTTTGAAGCATTCAGGAGTTGAGTTACCAGATACATCTTCTTCTTGGTTTGATAAGAGTATGAGTCTTGAGGAATGTGAGAAAATGTGTTTGAAAAATTGTTCTTGTTCAGCATATGCAAATTTAGATGTTAAAAGTAATAGTGGATGTTTGATTTGGTTTGGCAAGATAAGGGACTTGACAAAACATATTGACCAAGGACAAGATATTTTCATAAGACTTGCAGCTTCTGAGTTAGATCATAGAAGAAATAAGTGGAGCTTTAGCAACAAGAAACTTGCAGGTGCACTTGGAGGAATCACTTTATTCATCATGATTCTTGGATTGGCTGCATTTACATATATAAAGAGGAAAAAGCTTGCAAAGCCAGGGATGCTAAAAATATTTCACATGAAATGCAAAAGGGAGAAGGAAGATGTGCAATTATCAACTCTATTTAGTTTTTCAACCATATCTAAAGCTACAAATCACTTTTCAGACTGTAACAAAATAGGACAAGGTGGTTTTGGACCGGTATACAAGGGCATATTAGAAGACGGTTTGGAGATTGCAGTGAAGAGGCTATCAGAAAATTCGGAACAAGGAGAAGAACAGTTCAAAAACGAAGTTATGTTGATGGCGAAGCTTCAGCACCGTAATCTTGTAAAACTTCTTGGATGCTCAATTCACCAAGAGGAAAAGCTTTTGATCTATGAATTGATGCCCAACAGAAGCTTGGATTATTTCATTTTTGATTCAACATTAAAGGAAAAATTAGATCTGGCAAAACGATTCCAAATTATTGATGGAATTGCTCGAGGGCTGTTGTATCTTCATCAAGACTCTCGATTAAGAATCATCCATAGAGATCTGAAAACAAGTAATATTCTTCTGGATAATTATATGAATCCAAGAATATCAGATTTTGGTCTAGCTAGAACATTTAGAGGAGATCAAGACGAGTCCAAAACAAATAGATTGATGGGAACGTATGGTTATATGCCACCTGAATATGCGGTTCATGGATCGTTTTCAATCAAATCAGATGTATTTAGCTTTGGTGTAATTGTTCTGGAGATAATTAGTGGGAGAAAGAACCGAAACTTTTATGACCATCATCATAATCTTAATCTTCTTGGTCATGCATGGAGACTATGGAATGAAGCAAAAGCACAAGAGCTAATGGATGACTTATTCCATGGTACAACCATTCCTTGTGAAATGTTAAGATGCATTCATGTTGGTCTACTATGTGTGCAACAAATACCAGAACATAGACCAAACATGTCATTTGTAGTCTTAATGTTGAATGGTGAAAAATTGTTGCCTGAACCCAGCGAACCCGGGTTTTATTCCAGACCAGTTCATCATCCGATTCAGGTAGAATCATCTTCAAGAAGTTGCGAAGATTGTTCGCAAAATGAAGCATCTATGTCATTGTTAGAGGCGCGATAA 2481 0.3583 MQICKVLMLMLHTTFFFFIIPTLSIQYETLTTITPNDSIQGNETLVSSAGTFEAGFFNFADSQLQYFGIWYKTISPRTYVWIANRDSPIQNSTPILKLTYQGTLIIVDDSGRIVWSSNASTITEKPVLKPVLSLLDSGNLVVKDGEKILWESFDYPGDTFLAGMKLKTDLLNGHYRSLTSWKSIEDPSLGEFSYHIDVHGFPQLVTTKGKVLFSRGGSWNGYAFGGVSWLRNLKLFKFSLVFNDKEVSYEYETLKNGTITRLWLNPSGFAQRLVWSDREGYWEIISTRPMDQCEYYSSCDANSICNITNSPRTCQCLEGFVPKYYEKWNSLDWSGGCVRRKRLNCTGDWFLKHSGVELPDTSSSWFDKSMSLEECEKMCLKNCSCSAYANLDVKSNSGCLIWFGKIRDLTKHIDQGQDIFIRLAASELDHRRNKWSFSNKKLAGALGGITLFIMILGLAAFTYIKRKKLAKPGMLKIFHMKCKREKEDVQLSTLFSFSTISKATNHFSDCNKIGQGGFGPVYKGILEDGLEIAVKRLSENSEQGEEQFKNEVMLMAKLQHRNLVKLLGCSIHQEEKLLIYELMPNRSLDYFIFDSTLKEKLDLAKRFQIIDGIARGLLYLHQDSRLRIIHRDLKTSNILLDNYMNPRISDFGLARTFRGDQDESKTNRLMGTYGYMPPEYAVHGSFSIKSDVFSFGVIVLEIISGRKNRNFYDHHHNLNLLGHAWRLWNEAKAQELMDDLFHGTTIPCEMLRCIHVGLLCVQQIPEHRPNMSFVVLMLNGEKLLPEPSEPGFYSRPVHHPIQVESSSRSCEDCSQNEASMSLLEAR* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5026 826 Pfam D-mannose binding lectin 78 182 IPR001480 -
Psa5g5026 826 ProSiteProfiles Bulb-type lectin domain profile. 30 155 IPR001480 -
Psa5g5026 826 PIRSF SRK 1 826 IPR024171 GO:0004674
Psa5g5026 826 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 825 - -
Psa5g5026 826 SMART blect_4 36 156 IPR001480 -
Psa5g5026 826 Pfam Protein tyrosine and serine/threonine kinase 511 775 IPR001245 GO:0004672|GO:0006468
Psa5g5026 826 ProSiteProfiles EGF-like domain profile. 289 326 IPR000742 -
Psa5g5026 826 CDD B_lectin 36 156 IPR001480 -
Psa5g5026 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Psa5g5026 826 SMART serkin_6 507 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g5026 826 ProSiteProfiles PAN/Apple domain profile. 345 424 IPR003609 -
Psa5g5026 826 CDD PAN_AP_plant 343 424 - -
Psa5g5026 826 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 186 IPR036426 -
Psa5g5026 826 CDD STKc_IRAK 513 780 - -
Psa5g5026 826 ProSiteProfiles Protein kinase domain profile. 507 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g5026 826 SUPERFAMILY Protein kinase-like (PK-like) 489 778 IPR011009 -
Psa5g5026 826 Gene3D Phosphorylase Kinase; domain 1 474 582 - -
Psa5g5026 826 Pfam PAN-like domain 345 408 IPR003609 -
Psa5g5026 826 Gene3D - 25 153 IPR036426 -
Psa5g5026 826 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 21 825 - -
Psa5g5026 826 Pfam S-locus glycoprotein domain 215 323 IPR000858 GO:0048544
Psa5g5026 826 Gene3D Hepatocyte Growth Factor 344 421 - -
Psa5g5026 826 SMART ntp_6 345 423 IPR003609 -
Psa5g5026 826 Gene3D Transferase(Phosphotransferase) domain 1 583 784 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5026 Psa-Chr5 443759963 443763403 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5026 436 792 Receptor kinase-like Gene Family AT4G23230 50.975 5.06e-119 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa5g5026 PK_Tyr_Ser-Thr 3.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5026 - - gmx:100803275 1221.45