Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4987 ATGAAAATGATGAGAACAAACAACACATGCACAATGGAGAACCATAAGGTGCTGATGCTAATGCTAATGGTGTTTACTTTCTTCTTTTGCTCCATGCCAACTTTCTCTAAACAGAACACCTTTACTACTATTGCTCCAAATCAGTTTTTCCAATATAGTGATACACTTGTTTCTGCAGGTGGAACCTTTGAAGCAGGATTTTTCAACTTCGGAGATCCACAGCGCCAATACTTCGGTATATGGTACAAAAACATTTCACCTAGGACTATTGTGTGGGTTGCCAATAGAGACACACCTGTACATAACTCAACAGGATTGCTGAAACTCAATGATCAGGGAACTCTTGTTATTCTTGATGACTCGAAAGGCGTTGTCTGGTCCTCCAATTCATCGAGAATTGTGGTGAAACCAGCTCTTGTGCAGTTGTTGGATTCAGGAAACCTTGTTGTGAAAGATGCAAACAGTATTGGGAATTTGTTTTGGGAAAGTTTTGATTATCCCGGTAACACTTTCCTTGCTGGAATGAAGCTGAAAAGTAATTTAGTTACTGGTCCGTATAAATATATCAGATCATGGAAAAGTCCTGATGATCCTTCTGACGGTGAGTTTTCGTATGAGATAGATACTCGTGGCTTTCCCCAACTGGTTACTGCGAAGGGGGAAAGGTTACTGTATAGATCAGGCTCATGGAATGGATTTCTTTTCAGTGGAATTTCGTGGCCGATGCATAGAATCTATAATCTCTTATTTGTGTTCACTGACAAGGAAGTCTCTTATCAATACGAAACTTTGAACAGTTCAATTATTTCTAGAACGGTGCTAGATTCATATGGAACTTCGCAGCGTTTTCTATGGTCAGATGAAACACAGAATTGGGAGGCGACGGTTACTCGTCCTTCAGACCAGTGTGATGATTATGCCTTGTGTGGCATCAACTCTAACTGCAATATTAATGACTTCCCAATATGTGAATGCTTGAATGGTTTTATACCAAAATTTAAAGCGAAATGGGAGTCCTCCGATTGGTCTGGCGGGTGTGTAAGGAGAACGAAACTGAATTGTCTAGATGGAGATGGATTTCTGAAGTACACAAACATGAAATTGCCAGACACTTCATCGTCCTGGTATAACAGAAGCTTGAGCCTTGAGGAATGTATGACAGTGTGTTTGAAAAACTGTTCCTGCGTTGCATACGCAAATTTAGATGTCAGATATGGTGGAAGTGGCTGCTTACTTTGGTTTCATAGCGTCGTGGACATGAGAAAACACTTAGACCGAGGACAAGACATTTACATAAGACTGGCATTTTCCGAACTAGATCATACAAAGAATAAGAGAAACTTGAATATGAAGCTTGCTGCGATTTTCGTAGGGGTTATTGCGTTCATCATAGGACTTACCGCTCTTCTATTCGCGACATCAATGTTTAGGAAGAAGCTTGGGTGCATAAGAAAGTTAATTCAATGGAACCACAAGAAGGAGAAGAAAGAAGAAGACTTGCCAACAGTATTTGATTTTTCAACCATCATTAATGTCACAAATAACTTCTCTTACCAAAACAAGTTAGGAGAAGGTGGCTTTGGACCGGTATACAAGGGCGTATTGGCAGATGGACAAGAGATTGCTGTTAAGAGGCTTTCTGAAACATCGGGACAAGGAACTAAGGAGTTCAAAAATGAAGTAAAGTTAATGGCAACACTTCAGCACCGTAATCTTGTGAAACTTCTTGGTTGTTCTATTCATCAAGATGAAAAGTTGTTGATCTACGAATTCATGCCCAACAGAAGCTTGGATTACTTTATTTTTGATACTACGCGAAGTAAATTACTAGATTGGACAAAGCGCTTGGAAATTATTGACGGGATTGCTCGAGGGCTGTTGTATCTCCATCAGGATTCTACACTAAGAATCATACATAGAGATCTCAAGACAAGCAATATTCTTCTTGATATTGATATGATCCCGAAGATATCTGATTTTGGTTTGGCCAGATCATTCATGGGAGACCATGCCGAGGCTAACACAAATAGAGTGATGGGAACATACGGATATATGCCTCCAGAATATGCAGTGCATGGATATTTCTCAACCAAATCTGATGTTTTTAGCTTTGGAGTCGTTGTACTTGAGATAATTAGTGGGAGGAAGAATCGTGGATTTTGCGACCCTCAGCATCATCTAAACCTTCTTGGTCATGCGTGGAGACTATGGATTGAAGAAAGGCCAGAAGAGTTAATGGCTGACATATTATACAATGAAGCCATATGTTCAGAAATATTAAGATTTATTCATGTGGGTCTATTGTGTGTACAACGGAAACCAGAAAATAGGCCTAACATGTCATCTGTGGTTTTTATGTTAAAGGGTGAAAAGTTACTCCCACAACCATGCGAACCCGGGTTCTACGATGGAAGAGAAAATACAAATAGCACAGGATCTTCTTCAAAGGGGTGTTCAATAAATGAAGCTTCAATCTCATTGTTAGAAGCTCGATAG 2496 0.3982 MKMMRTNNTCTMENHKVLMLMLMVFTFFFCSMPTFSKQNTFTTIAPNQFFQYSDTLVSAGGTFEAGFFNFGDPQRQYFGIWYKNISPRTIVWVANRDTPVHNSTGLLKLNDQGTLVILDDSKGVVWSSNSSRIVVKPALVQLLDSGNLVVKDANSIGNLFWESFDYPGNTFLAGMKLKSNLVTGPYKYIRSWKSPDDPSDGEFSYEIDTRGFPQLVTAKGERLLYRSGSWNGFLFSGISWPMHRIYNLLFVFTDKEVSYQYETLNSSIISRTVLDSYGTSQRFLWSDETQNWEATVTRPSDQCDDYALCGINSNCNINDFPICECLNGFIPKFKAKWESSDWSGGCVRRTKLNCLDGDGFLKYTNMKLPDTSSSWYNRSLSLEECMTVCLKNCSCVAYANLDVRYGGSGCLLWFHSVVDMRKHLDRGQDIYIRLAFSELDHTKNKRNLNMKLAAIFVGVIAFIIGLTALLFATSMFRKKLGCIRKLIQWNHKKEKKEEDLPTVFDFSTIINVTNNFSYQNKLGEGGFGPVYKGVLADGQEIAVKRLSETSGQGTKEFKNEVKLMATLQHRNLVKLLGCSIHQDEKLLIYEFMPNRSLDYFIFDTTRSKLLDWTKRLEIIDGIARGLLYLHQDSTLRIIHRDLKTSNILLDIDMIPKISDFGLARSFMGDHAEANTNRVMGTYGYMPPEYAVHGYFSTKSDVFSFGVVVLEIISGRKNRGFCDPQHHLNLLGHAWRLWIEERPEELMADILYNEAICSEILRFIHVGLLCVQRKPENRPNMSSVVFMLKGEKLLPQPCEPGFYDGRENTNSTGSSSKGCSINEASISLLEAR* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4987 831 Pfam Protein tyrosine and serine/threonine kinase 518 784 IPR001245 GO:0004672|GO:0006468
Psa5g4987 831 SMART ntp_6 355 434 IPR003609 -
Psa5g4987 831 Pfam D-mannose binding lectin 89 193 IPR001480 -
Psa5g4987 831 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 32 831 - -
Psa5g4987 831 SMART blect_4 47 167 IPR001480 -
Psa5g4987 831 Pfam PAN-like domain 354 420 IPR003609 -
Psa5g4987 831 ProSiteProfiles Protein kinase domain profile. 516 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g4987 831 Pfam S-locus glycoprotein domain 225 332 IPR000858 GO:0048544
Psa5g4987 831 CDD PAN_AP_plant 350 435 - -
Psa5g4987 831 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 32 831 - -
Psa5g4987 831 SUPERFAMILY alpha-D-mannose-specific plant lectins 90 198 IPR036426 -
Psa5g4987 831 Gene3D Phosphorylase Kinase; domain 1 481 591 - -
Psa5g4987 831 ProSiteProfiles Bulb-type lectin domain profile. 41 163 IPR001480 -
Psa5g4987 831 PIRSF SRK 12 831 IPR024171 GO:0004674
Psa5g4987 831 ProSiteProfiles PAN/Apple domain profile. 354 435 IPR003609 -
Psa5g4987 831 Gene3D Hepatocyte Growth Factor 351 434 - -
Psa5g4987 831 CDD STKc_IRAK 522 789 - -
Psa5g4987 831 Gene3D Transferase(Phosphotransferase) domain 1 592 793 - -
Psa5g4987 831 CDD B_lectin 55 167 IPR001480 -
Psa5g4987 831 SMART serkin_6 516 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g4987 831 SUPERFAMILY Protein kinase-like (PK-like) 499 787 IPR011009 -
Psa5g4987 831 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Psa5g4987 831 Gene3D - 36 164 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4987 Psa-Chr5 442340911 442344574 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4987 455 801 Receptor kinase-like Gene Family AT4G23230 51.724 2.59e-115 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa5g4987 PK_Tyr_Ser-Thr 5.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4987 - - gmx:100819820 1185.63