Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4922 ATGAACTCCAAGATTAATATACAGAAAAAAATATTAAACATATATTTTATCAAGCTGGCTATTGCAAGGGCTTTCTATCAAAACTCTTCTATTTTAATTCTCGACGAGGCAACTTCTGCCTTAGATAGTAAATCTGAGTTATTAGTGAGGCAAGCTGTGGAGCGATTAATGGAGAATCGCACGGTGCTTGTGATTTCGCATCGCTTGGAAACCGTTATGATGGCGAAAAGAATATTCCTTTTGGATGATGAAAAGCTGGAAGAGCTGCCTCGATCAACTATATTGAACGGTCACATGGATTCATTGCTATCATCTGGGCTTATTGTTTGA 330 0.3788 MNSKINIQKKILNIYFIKLAIARAFYQNSSILILDEATSALDSKSELLVRQAVERLMENRTVLVISHRLETVMMAKRIFLLDDEKLEELPRSTILNGHMDSLLSSGLIV* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4922 109 Gene3D - 16 106 IPR027417 -
Psa5g4922 109 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 18 100 IPR039421 -
Psa5g4922 109 PANTHER ABC TRANSPORTER B FAMILY MEMBER 29, CHLOROPLASTIC 18 100 - -
Psa5g4922 109 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 88 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4922 Psa-Chr5 438460979 438461598 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4922 18 106 Calmodulin-binding Proteins AT2G36910 46.067 1.09e-17 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4922 K02021 - gmx:100788075 150.214