Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4901 ATGGCTGCAACTTTGGTGGGAGGTGCTTTTCTCTCTGCAGCTGTTCAAACCTTAGCTGTGCTGGATGATGCTGAAGACAAGCAGATCAACAACGTTGCTGTCAAACAATGGCTTGATGACTTGAAAGTTACAGTCTTTGATGCTGAGGATTTGCTCAACCAAATTACCTATCATTCTTTGAGATCCAGAATTGAGAATACACAAGCTTCAAACAAAACTCATCAGGTGTGGAACTTTCTTTCTTCTCCTTTTAGAAACATCTACGGAGAGATCAATTCCGAAATGAAGATCATGTGTGAAAAAGTACAACTTTTTGCACAGCATAAAGATATCCTTGGTTTGCAAACTCAAACTTCTAGAGTTTCTCATAGAACACCTTCAAGTTCAAGGAACAATGAATCTTTCATGGTGGGAAGGAATGATGAGAAAGATGGACTAATCAGTACGCTCATATCAGACAGTGACACCAGCAGGCATACTAATTTAGGCGTTGTTGCAATTTTGGGTATGGGAGGTGTTGGTAAAACGACCCTAGCACAAGTTGTTTACAATGATATAAAAGTTGAACAACATTTTGATCTCAAAGCATGGATTTGTGTATCCGAGGATTTCAATGTTGTTAGAATAACCAAGTCTCTCCTTGAATGTGTTGTTAGAAATACAACATCCGTTAATTCAAATGTCTGGGAAAGAGAAAGTTGTGGTAGGCTTGAATGTGGATACATCTCTAAAAATGTTCGCCATTTGTCATATAACCAAGAAGAGTATGACATTTTCATCAAGTTTGAGAATTTCTACAATTTCAAATGCTTGCGGAGCTTCCTGCCCATTTACTTCTTACCCAATTACTTATGGAGAGCACAAAACTACTTATCCCTCAAGGTGGTTCATGATTTAATACCCACACTCAAAAGGTTGCGCATGTTATCACTATCAACATATAGAAACATCACAAAGTTGCCAGATTCGATTGGCAATTTAGTGCAGTTGCGGTATCTGGATCTCTCCTTCACAAGAATCAAAAGCTTGCCTCATACTACATGTAACCTTTATAATTTGCAAACCTTGCTTTTATTTGGTTGTTGTGATCTCACTGAATTGCCACCGAATATGGGAAATTTAATAAATTTACGCCATCTTGATATAAGTGGGACAGATATAAAGGAGTTGCCTACAGAAATTGGTGGACTAGAAAACCTTCAAACTCTAACTGTTTTTGTAGTGGGGAAGGGACAAGTAGGGTTAGGTATGAAAGAGCTTAAGAAATTCCCACACCTACAAGGAAAACTTACCATCAAGAACCTGCATAACGTCATTGATGCCAAGGATGCACACTATGCCAACCTGAAAAACAAAGAGCGGATTGAAGAGTTAGAACTGCTATGGGGAAAACATAGTGAAGACTCACTAAATGTGAAAGCTGTGCTTGATATGTTGCAACCACCAACGAATCTGAAGAGCCTTAAAATTGACTTGTATGGTGGGACAAGCTTTCCGAGTTGGTTGGGAGATTCTTCTTTTTCTAACATGGTCTCCCTTTGCATCAGTAATTGTGAATATTGTGTGACGCTCCCACCGCTGGGGCAGCTACCTTCTCTCAAGGACCTTGAAATATGTGGCACGAAAATGTTAGAGACAATTGGTCCAGAATTCTACTGCATCCAGCCAAGAGAATGTTCCGATTCATCGTTCCAGCCATTCCCGTCCCTTGAATGTCTTAAAATTCACGACATGCCAAACTTGAAGGTGTGGCTTCCCTTTGAAGGAAGCAATTTTGCTTTTCCTCGTCTTAGAACTTTAAGGTTATATGACTGTCATGAACTTAGGAGACATTTGCCAAATCAACTTTCTTCCATAGAAGAAATTGAAATAAAAGGATGTGCTCATCTATTGAAAATACCACCTACATTGCATTGGCTATCATCAATAAAGCATGTAAGGATCAACTGCTTTTATGGTGTATTTGCTTTGCCGAAAATGATTCTGAGCAGTACTTGTCTTCAACGCTTGGAACTCTATGCTATTCAGTCTCCCTTAGCATTTCCGATAAATGGCCTACCCACTTCATTGCGGTCACTTGATATTGTTAGATGTAAGAGGTTGGCATTCATGCCTGCTGAAACGTGGAGCAATTACACGTCGCTTGAGAGTTTGTGGTTACGTAGTAGTTGCGATGCACTTAAATCATTCACACTTAATGGTTTCCCTGCCCTGCAAAGACTTAACATTACTGATTGTGCGAACCTAGATTCCATTTGTATTTCAGAAAGTCCTTCACACCGCCCTTCGAGCCTTCGATCACTTACAATCATATGCCATGACTCAATTGAATCACTTAAAGTCAATCTTCGGATGGACACGCTCACTGCTCTTGAAGAGCTGTCTCTTCAATGTGCAAACTTGTCATTTTGTGAACTTGTTTGCCTACCTCCCAAGTTACAATCAATTAAGATTCGGTCCCAGAGAACAACTCCGCCTGAAACGGAATGGGGTCTCCAAGGCCTCGCTTCTCTTTCAAGCTTCAGTATTGGAGGCTGTGATGATATTGTTAACACCTTATTAAAGAAGTCGCTGCTACCCAAATCCATTGTGTCTCTCTTTATAACTTATCTCTATGAAATGAAGTCCTTTGAAGGAAATGGGCTTCAACGCCTCTCGTCTCTTGAAAATCTCCACTTTCGTAATTGTCAACAGCTCGAGTCATTTCCAGAAAACTGTCTCCCTTTGTCGCTGAAATCGCTTCAATTATGGAGTTGTGAAAGACTTGAAACATTACCAGAAGAAAGCTTCCCTGGCTCTCTTAAGCGGCTGGTCATTTGGCGATGTCCCGTATTACAAGAAAGGTATAAAAGGCAGGAGCATTGGTCCAAAATTGCTCACATCCCTGTCATAGAAATAGAAGCCCAAGTCACAATATGA 2919 0.4029 MAATLVGGAFLSAAVQTLAVLDDAEDKQINNVAVKQWLDDLKVTVFDAEDLLNQITYHSLRSRIENTQASNKTHQVWNFLSSPFRNIYGEINSEMKIMCEKVQLFAQHKDILGLQTQTSRVSHRTPSSSRNNESFMVGRNDEKDGLISTLISDSDTSRHTNLGVVAILGMGGVGKTTLAQVVYNDIKVEQHFDLKAWICVSEDFNVVRITKSLLECVVRNTTSVNSNVWERESCGRLECGYISKNVRHLSYNQEEYDIFIKFENFYNFKCLRSFLPIYFLPNYLWRAQNYLSLKVVHDLIPTLKRLRMLSLSTYRNITKLPDSIGNLVQLRYLDLSFTRIKSLPHTTCNLYNLQTLLLFGCCDLTELPPNMGNLINLRHLDISGTDIKELPTEIGGLENLQTLTVFVVGKGQVGLGMKELKKFPHLQGKLTIKNLHNVIDAKDAHYANLKNKERIEELELLWGKHSEDSLNVKAVLDMLQPPTNLKSLKIDLYGGTSFPSWLGDSSFSNMVSLCISNCEYCVTLPPLGQLPSLKDLEICGTKMLETIGPEFYCIQPRECSDSSFQPFPSLECLKIHDMPNLKVWLPFEGSNFAFPRLRTLRLYDCHELRRHLPNQLSSIEEIEIKGCAHLLKIPPTLHWLSSIKHVRINCFYGVFALPKMILSSTCLQRLELYAIQSPLAFPINGLPTSLRSLDIVRCKRLAFMPAETWSNYTSLESLWLRSSCDALKSFTLNGFPALQRLNITDCANLDSICISESPSHRPSSLRSLTIICHDSIESLKVNLRMDTLTALEELSLQCANLSFCELVCLPPKLQSIKIRSQRTTPPETEWGLQGLASLSSFSIGGCDDIVNTLLKKSLLPKSIVSLFITYLYEMKSFEGNGLQRLSSLENLHFRNCQQLESFPENCLPLSLKSLQLWSCERLETLPEESFPGSLKRLVIWRCPVLQERYKRQEHWSKIAHIPVIEIEAQVTI* 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4901 972 Pfam Rx N-terminal domain 19 68 IPR041118 -
Psa5g4901 972 Gene3D - 11 97 - -
Psa5g4901 972 SUPERFAMILY L domain-like 243 665 - -
Psa5g4901 972 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 120 225 IPR027417 -
Psa5g4901 972 Gene3D - 117 245 IPR027417 -
Psa5g4901 972 SMART LRR_typ_2 327 350 IPR003591 -
Psa5g4901 972 SMART LRR_typ_2 374 397 IPR003591 -
Psa5g4901 972 Gene3D Ribonuclease Inhibitor 286 677 IPR032675 -
Psa5g4901 972 SUPERFAMILY L domain-like 615 949 - -
Psa5g4901 972 PANTHER DISEASE RESISTANCE PROTEIN RP 252 644 IPR044974 GO:0006952
Psa5g4901 972 PANTHER DISEASE RESISTANCE PROTEIN RP 19 220 IPR044974 GO:0006952
Psa5g4901 972 PRINTS Disease resistance protein signature 164 179 - -
Psa5g4901 972 PRINTS Disease resistance protein signature 883 899 - -
Psa5g4901 972 Pfam NB-ARC domain 159 222 IPR002182 GO:0043531
Psa5g4901 972 PANTHER - 19 220 - -
Psa5g4901 972 PANTHER - 252 644 - -
Psa5g4901 972 Gene3D Ribonuclease Inhibitor 682 963 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4901 Psa-Chr5 436578056 436581919 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4901 298 403 WRKY Transcription Factor Family AT4G12020 41.121 4.80e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4901 - - mtr:MTR_3g032370 876.7