Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4891 ATGGATGATGGAAATTCGGAGGTTTCTGATAAACTTTCAGATAATGTTCTATTTTCGAATCCAGAATCATGTAGCAATTTTCAAGCTTCAACATCTATGAACATGGATACTGAATTATCTAAGAGCACTACCAAAACATGCACTCACACTCACACATGCAATCCACCTGGTTTCGATTTCGATGATTCTATTCATACACACACGTGTTATCACACGCACACTCGAGTTTTTGCATCCGAAGATGACACGAATTCGAGGCCAAAAAGGAGTTTTGGCAATAGAGAAGCTGTTAAGAAGTATAGGGAGAAGAAGAAGGCACAGACAGCTTATTTGGAGGATGAAGTTAAGAAGTTGAAACTTGTGAATCAACAACTTGTGAGGAAGTTGCAAGGGCAGGCGCTACTTGAAGCGGAGTTGCTGAGGTTGAGGAAGATTTTGGTTCAACTTAAGGGGAAAGTTGACTGTGAATTAGGTTCTTTCCCTTTTCAAAAGAAGTGTTTCTCTTCTAGTAACAACGATGCTTCTGATTGA 531 0.3974 MDDGNSEVSDKLSDNVLFSNPESCSNFQASTSMNMDTELSKSTTKTCTHTHTCNPPGFDFDDSIHTHTCYHTHTRVFASEDDTNSRPKRSFGNREAVKKYREKKKAQTAYLEDEVKKLKLVNQQLVRKLQGQALLEAELLRLRKILVQLKGKVDCELGSFPFQKKCFSSSNNDASD* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4891 176 Gene3D - 73 150 - -
Psa5g4891 176 PANTHER BASIC LEUCINE ZIPPER 23 1 167 - -
Psa5g4891 176 SUPERFAMILY Leucine zipper domain 87 130 IPR046347 GO:0003700|GO:0006355
Psa5g4891 176 SMART brlzneu 80 148 IPR004827 GO:0003700|GO:0006355
Psa5g4891 176 Pfam Basic region leucine zipper 83 138 IPR004827 GO:0003700|GO:0006355
Psa5g4891 176 PANTHER CCAAT/ENHANCER BINDING PROTEIN 1 167 - -
Psa5g4891 176 CDD bZIP 93 130 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4891 43 170 bZIP Transcription Factor Family AT3G51960 53.731 1.17e-47 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa5g4891 bZIP_2 3.2e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4891 K25785 - gmx:100527780 214.157