Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4849 ATGGCTCTTTCTTGTTACACCTTCATCACTCCTTCTATACCCTCTCTTTCTCTACACAATCATCATTCATCAAAGCTTCCCCTTAGAGTTTCTTATATAAATGCTTCCTTAAACTCTTCTGATTCAAAGGCACCATCATCATCATCATCATCTTCTTCTTCTTCACCACAAAGTGTGCCATCTTCAACCCCTTATGTTGAGTCTAGGCCACATGAGCCTGCCTTTAACTATGCCTTTGCTAACACTAATGGCAACCCACTTTTTAGGATGCTTCAAAATACAGAATCTTCCATTGAAAGGGTGATTTTCGACTTCCGTTTTCTGGCACTCTTTGCTGTTGCAGGCTCCTTGGCTGGCTCACTCCTCTGCTTTCTAAATGGTTGTGTTTATATTGTTGGTGCATACAAAGTGTATTGGACAAGCTGTGTCAAAGGAGTTCACACCGGAAAGATGGTTCTGCTTCTGGTCGAAGCAATTGATGTTTATCTTGCTGGTACTGTTATGTTGATTTTCGGTATGGGCTTATATGGGCTGTTCATCAGCAACACGCCTCCTGATGTGCCACCTTCTGTCGACCGTGCCCTCAAAGGATCTTCTCTCTTTGGAATGTTTGCTTTGAAGGAGAGACCTAAATGGATGAAAATAAGCTCACTTGACGAATTGAAAACGAAAGTAGGGCATGTTATTGTAATGATTCTTCTTGTAAAAATGTTTGAGAGGAGCAAAATGGTTGTAATTGCAACAGGTTTAGACTTGCTTAGTTACTCAATGGCTGCAGCTGCAACTATGATAGGAGGTGCTTTTCTCTCTGCAACGGTTCAAACCTTACTTGAGAAACTTGCCTCAATAGAGTTTTTTGATTACATCCGAAACACCAAACTGGATGTCTCCCTCTTGAGAAAGTTACAAACAACCCTGCTCACTCTCCAGGCTGTGTTGGATGATGCAGAAGAGAGGCAGATCAACAATCTTGCTGTCAAAAAATGGCTAGATGACTTGAAAGATGTTGTCTTAGATGCTGAGGATTTGGTCAATCAAATAAGTTATGATTCACTTTGTTGTGGATGGCCGAGGGCTTCCTTGATTGTTCTCAAGGGGTTTAGGCCTTTCTACAATTTTAAATGCTTGCGAAGCTTCCTACCCATTACTTCATGGAGGTCAGATAATTACTTATCCATCAAGGCGGTTGATGATCTGCTACCATTATTCAAAAGGTTGCGTGTGTTGTCTCTATCAAAGTATGTAAACATCACCAAGCTACCGGATTCAATCAGCAATTTGGTGCAATTGCGTTATCTAGATTTATCCTTCACTAAAATCAAAAGTTTGCCTGATACAGGATGTAACCTTTACAATTTGCTGACCTTGATTTTATTAGATTGTGTGTGTCTCACTGAATTGCCACTCCACATGGAAACCTTAATCAGTTTACGTCACCTTGATATAAGTGGGACTGACATAAAAGAGTTGCCTATGGAAATTGACAGACTAGAAAACCTCCAAACTTCGTCATTGTGA 1518 0.4065 MALSCYTFITPSIPSLSLHNHHSSKLPLRVSYINASLNSSDSKAPSSSSSSSSSSPQSVPSSTPYVESRPHEPAFNYAFANTNGNPLFRMLQNTESSIERVIFDFRFLALFAVAGSLAGSLLCFLNGCVYIVGAYKVYWTSCVKGVHTGKMVLLLVEAIDVYLAGTVMLIFGMGLYGLFISNTPPDVPPSVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVVIATGLDLLSYSMAAAATMIGGAFLSATVQTLLEKLASIEFFDYIRNTKLDVSLLRKLQTTLLTLQAVLDDAEERQINNLAVKKWLDDLKDVVLDAEDLVNQISYDSLCCGWPRASLIVLKGFRPFYNFKCLRSFLPITSWRSDNYLSIKAVDDLLPLFKRLRVLSLSKYVNITKLPDSISNLVQLRYLDLSFTKIKSLPDTGCNLYNLLTLILLDCVCLTELPLHMETLISLRHLDISGTDIKELPMEIDRLENLQTSSL* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4849 505 Pfam Uncharacterized protein family, UPF0114 102 240 IPR005134 -
Psa5g4849 505 Gene3D Ribonuclease Inhibitor 375 505 IPR032675 -
Psa5g4849 505 PANTHER OS06G0710300 PROTEIN 31 258 - -
Psa5g4849 505 Coils Coil 299 319 - -
Psa5g4849 505 Pfam Rx N-terminal domain 268 354 IPR041118 -
Psa5g4849 505 Gene3D - 272 367 - -
Psa5g4849 505 SUPERFAMILY L domain-like 366 502 - -
Psa5g4849 505 MobiDBLite consensus disorder prediction 43 65 - -
Psa5g4849 505 PANTHER - 31 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4849 Psa-Chr5 431425303 431428699 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4849 417 500 WRKY Transcription Factor Family AT4G12020 43.529 2.83e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4849 - - gmx:100799451 340.502