Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4843 TTTCAGTTGCCTGGACGTACAGATAACGAGATAAAGAACTTTTGGTACGCAAGATCTAAGAAACGGCAACGAGCTGGCTTACCAATCTATCCTGAAGAGATAACATCAAAACCTGCAATAAATGGCAGTCAAGAAAGTGCTGAGGCATTGGCAAATGAATCCAGCCAGCAAGTTGAAACAGAAACCTTTAACTTGGATATAACTGACTTGGACCTTAAATATTACAAATTCAGCCCAGATATGTTGCCACCATTTTTTGATATTCAAGATTACAAATCAATAAGTGACTTGGTTGGACGGTACTCAGATCCGTCTCATAATACCTTATCCATGCCTAGTGAAGTAGATCAGCGCAGATATTTGTTCAGTGGCAGTAGTGCTGCTGACCCGGAAGTATTTGATGAGTATAGCCAATATGCTATGTTGTCTACTCCATGTGATCCGATTCTTGACACCAACCTTGTTCATGGATATGATAATCCTATACCTGGTTTTCATGCCGCGTCAAATATCTCTTATCCTGAGCCCATATATGGGTCCATGAGGTTTGAGCCCCCTTCATTCCAAAATTTACCGCAACAGTGTAACTGGCCGCAACTTCCCTCATTAGAGTATGTTGACATGTTGGTTCCGTGTCCTCCGATTGACCCTGTTGACAAGTCGGTTCCGTCTCCTCCGATTGACCCTTGTCCGTCCGTTCCAGATTCTCCGGACTACAATCATTTTATTGATTCAATAGTAAACTTCAGTTCAGATCAAAATTTGAAAGGCTTAAATATTGATTCATTGCAAACAAACACTGATAACAAGGCTCCCAATGAAGCAGACACTAGTACACAATGGAATAGACTAGATTATGATCAGCACACTGCTATAGTTAATCTAGATTATGATCAGCACACTGATATAGTTAGTCGCCAAATAAACTTCTTAAAACGGGTCCGCTCAAAAATTAAAAACCGTGGATCATTCAATCGGCTTCCAGCTTATTATACTTCCAACAACGAATATAATTTGTATTGA 1023 0.4018 FQLPGRTDNEIKNFWYARSKKRQRAGLPIYPEEITSKPAINGSQESAEALANESSQQVETETFNLDITDLDLKYYKFSPDMLPPFFDIQDYKSISDLVGRYSDPSHNTLSMPSEVDQRRYLFSGSSAADPEVFDEYSQYAMLSTPCDPILDTNLVHGYDNPIPGFHAASNISYPEPIYGSMRFEPPSFQNLPQQCNWPQLPSLEYVDMLVPCPPIDPVDKSVPSPPIDPCPSVPDSPDYNHFIDSIVNFSSDQNLKGLNIDSLQTNTDNKAPNEADTSTQWNRLDYDQHTAIVNLDYDQHTDIVSRQINFLKRVRSKIKNRGSFNRLPAYYTSNNEYNLY* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4843 340 MobiDBLite consensus disorder prediction 37 55 - -
Psa5g4843 340 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 2 290 - -
Psa5g4843 340 MobiDBLite consensus disorder prediction 36 55 - -
Psa5g4843 340 PANTHER MYB DNA-BINDING DOMAIN PROTEIN 2 290 - -
Psa5g4843 340 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 23 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4843 Psa-Chr5 430616585 430617987 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4843 2 226 MYB Transcription Factor Family AT5G06100 30.769 1.96e-19 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4843 K09422 - gmx:100800658 140.198