Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4814 ATGGATGCAATATACTTAGGGTTGTTTGGTGTAGTTATTGGGTTTGTGCTATGGTGGTGGAATGAGTATTGGTATGTTCTTCCTCTCAAATTCAAGTGCTTAAAATCTTCAACAAAGTTGCCACCAGGTCATATGGGGTTGCCTTTCATTGGAGAAATGATAAGTTTTCTTTGGTACTTCAAAATTGTTCGACGCCCAGATGATTTCATTAACGCAAAGCGTCGCAAATATGGTGATGAAGTAGGTATGTTTAGAACACATCTCTTTGGGGCACCATCCATCTTAGTATACACTCCAAATATTCACAAATTTGTGTTACTTAAAGAAGATAGACTCATAGCAGAATGGCCCACAATTGACCTTATGGGCCGAACTTCATTGGTGGCTGTCCATGGAAAGGCCCATGCCCGCGTCCGCAACTTTGTTACCAATGTTATTAATCGGCCCGATGCCCTAAACCGCATCGCTACTCTTGTTCAACCTCGCATGATCAATGCTCTTCAAACTTGGGCTAAAATCGGCAAAATCAATGCCCGATTCGAAACTCAAAAGTTGACATTCGAGAACATTGGAAAATTATTTATGGGCAAGGAACCAAGTCCTCTTCTAAATTCATTGGATAAGCTCTACCAAGACTTGCTTTTAGGAGTGAGAGCATATCCAATTAACATCCCTGGTTTTGCATACCACCATGCTCTTCAATGTAGAAGAAAGCTCGAGGATTTTTTCTACATGGAATTAGATAAAAGAAAGAATGAAAACAAGATAGAAACAATGGATGACCTAATGGATGGATTGATGAAAATTGAAGATGAAGAAGGTGACAAATTGAGTGACAAAGAAGTTATAGACAATATTGTCTCTCTTGTGGCTGCTGGATATATCTCTACTTCTCTTATATCCACTTGGGCTATTTACCTTCTTGCAAAGAATCCAATTGTGCTCAAAAAATTAAGGGAAGAGAACATGACTTTTACAAAGGGGAGTCCTGAAGATTTTATTACACCTAAAGATGTTTCAAATTTGAAATACACAAACAAGATTGTTGAAGAAGTGATAAGAATGGCCAATGTTGCAGCTTGTATTTTTAGAAAAGTTGACACAGAAGTTAATTATAAAGGTTATAAGATGCCTAAAGGATGGACGGTTATTCTCTTCCTTCGTTATCTTCATACAGATCCGGAGAATTTTAAAAATCCTATGTATTTCAATCCTGATCGATGGGATGAGCCATTAATGTCGGGAACATACCAACCTTTTGGTGGCGGACCAAGACTTTGCCCTGGAAATACGCTCGCAAGAATTCAACTAGCAATTCTACTTCATCATTTGTCTATAGGATACAGGTGGGAGCTTGTTAATCCAAATGCAGATATAATTTATCTTTCACATCCTGCTCCAATGGATGGGGTTGAAGTTAGGTTTAGCAAGTTGTGA 1437 0.3848 MDAIYLGLFGVVIGFVLWWWNEYWYVLPLKFKCLKSSTKLPPGHMGLPFIGEMISFLWYFKIVRRPDDFINAKRRKYGDEVGMFRTHLFGAPSILVYTPNIHKFVLLKEDRLIAEWPTIDLMGRTSLVAVHGKAHARVRNFVTNVINRPDALNRIATLVQPRMINALQTWAKIGKINARFETQKLTFENIGKLFMGKEPSPLLNSLDKLYQDLLLGVRAYPINIPGFAYHHALQCRRKLEDFFYMELDKRKNENKIETMDDLMDGLMKIEDEEGDKLSDKEVIDNIVSLVAAGYISTSLISTWAIYLLAKNPIVLKKLREENMTFTKGSPEDFITPKDVSNLKYTNKIVEEVIRMANVAACIFRKVDTEVNYKGYKMPKGWTVILFLRYLHTDPENFKNPMYFNPDRWDEPLMSGTYQPFGGGPRLCPGNTLARIQLAILLHHLSIGYRWELVNPNADIIYLSHPAPMDGVEVRFSKL* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4814 478 PRINTS P450 superfamily signature 292 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g4814 478 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g4814 478 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g4814 478 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g4814 478 SUPERFAMILY Cytochrome P450 35 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g4814 478 Gene3D Cytochrome P450 31 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g4814 478 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
Psa5g4814 478 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 12 471 - -
Psa5g4814 478 Pfam Cytochrome P450 41 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g4814 478 PRINTS E-class P450 group I signature 281 298 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g4814 478 PRINTS E-class P450 group I signature 301 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g4814 478 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g4814 478 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g4814 478 PRINTS E-class P450 group I signature 417 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g4814 478 PRINTS E-class P450 group I signature 427 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g4814 478 PANTHER CYTOCHROME P450 26 12 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4814 Psa-Chr5 427962754 427966438 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4814 4 477 Cytochrome P450 AT2G32440 35.759 2.98e-101 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4814 - - mtr:MTR_0045s0060 859.751