Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4800 ATGGATGATTCAGTGAGAGTGATCTCCACAAGCATAATCCAAGCACCAAGTGACAACAATAACAACAACAATCGAAACTCAACTAACTTTCAGAAAATCCATTTAACACCATGGGATCTCCAATATTTCCCACATGAAGCCATTCAAAAAGGCCTTCTTTTCCACCAACCAATTGATCCATCAAAAAACCAAATCCATCATTTGAAACAAACCCTTTCCACCACTCTTTCTTTCTTTCCACCACTCGCCGGCCGTCTGGTAATCACTCAACACAAAGAAGAAGAAAACAACACCACCTCATCATCATGTTACATCATCTGCAACAACGTTGGCGCGCTCTTCGTCCACGCCAAAGCAGAAAAGACTAGCGTTTCCGACATCCTTCAACCCAAGAACCACTTTGTACCTCCCATTGTGTACTCTTTCTTCCCTCTCAACGGCGTCAAAAACTGGGAAGCCACTTCCCAGCCTATTCTTGCTGTCCAAGTAACGGAGTTACTGGACGGTCTCTTCATAGGCTTCACAATAAACCACGTTGCATCAGACGGGAAGTCCTTTTGGCATTTCATCAATTCTTGGTCTCAAATCTCACGAGGAGATTCTTTAAACAAATATCCGTCACTCCAACGCTGGTTTCCAAACGACGTTCATCAACTTCCAATACGTTTCCCTTTCACAGCTGAATTCACTCATAGCTCCAAGTCCACGAACATAGCTGAAAGAGTTTTCCATTTCACAAAGGAGAAGATCGCCGAACTGAAATCAAAAGCAAACACAGAAACTGAAACTGAGAATGTTCAAATATCTTCGCTTCAAGCGGTATTATCTCATGTTTTACGTTCTGTGGTTCGTTGCGAAAGACTTGATCCTCAACAAGACGTTCTTTACATATTGGTGATCGGGGTTAGGCCAAGGATGATTCCACCGCTCGAAGATGAATATTTCGGAAACGCGGTGTTGCTCTGTGGTTTCACGATGAAAGCATGGGAGATTTTAGAGTGTGGGATTGGAAAGGTGGCATTGGAGATGAACAAGATGATTTCCGTAAATTCTGATTATGAGAAAATGAAAAACAGATACCAGTGTTGGTTGACAAACCCGAAGTTGCTTACAAGTGGTGACTTCACTCGTTGTTATACATTGACAACAAGCAGTTCTCCGAGGTTTGATGTTTATGGTAATGATTTCGGCTGGGGAAAGCCGGTGGCAGTTCGATGTGGGGGTGCGAATAAAAGAAACGGCAAGATTGCTGTGTTTACTGGAGCAGAAGAGGGCAGTATAGACATTTCAATGACTCTTCCTTATGAGATCTTGGAGGCCATGGGAAATGACACTGAGTTCATGCATTAA 1350 0.4304 MDDSVRVISTSIIQAPSDNNNNNNRNSTNFQKIHLTPWDLQYFPHEAIQKGLLFHQPIDPSKNQIHHLKQTLSTTLSFFPPLAGRLVITQHKEEENNTTSSSCYIICNNVGALFVHAKAEKTSVSDILQPKNHFVPPIVYSFFPLNGVKNWEATSQPILAVQVTELLDGLFIGFTINHVASDGKSFWHFINSWSQISRGDSLNKYPSLQRWFPNDVHQLPIRFPFTAEFTHSSKSTNIAERVFHFTKEKIAELKSKANTETETENVQISSLQAVLSHVLRSVVRCERLDPQQDVLYILVIGVRPRMIPPLEDEYFGNAVLLCGFTMKAWEILECGIGKVALEMNKMISVNSDYEKMKNRYQCWLTNPKLLTSGDFTRCYTLTTSSSPRFDVYGNDFGWGKPVAVRCGGANKRNGKIAVFTGAEEGSIDISMTLPYEILEAMGNDTEFMH* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4800 449 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 4 448 - -
Psa5g4800 449 Pfam Transferase family 29 448 - -
Psa5g4800 449 Gene3D - 228 443 IPR023213 -
Psa5g4800 449 Gene3D - 3 219 IPR023213 -
Psa5g4800 449 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 4 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4800 Psa-Chr5 426938538 426941669 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4800 68 436 Monolignol Biosynthesis Gene Families AT5G48930 27.226 2.72e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4800 - - gmx:100500257 489.189