Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa5g4779 | ATGGATGGAGGTGTTATTCAACAGTTATTGAGGAGTAAACTCCAATATCATTCTCCTAATCCTTTGTTTGTGTCATCCATTATCACAAAGAAAGATGGTGTTGGTTCTACAAGCAGCAGATCCTTAAAAGCCCTTGCATTAATTGGAGATGGTGTGTCAGGGTTATTAGGTTTTGTAACAACAGAATCAGTTGATGAAGCAGAGCATGGTCTGGCTTCTCCAAGTGATCTATGGCCTCACGATGGCATCCTCAGTTCATATGACTGTGCTTCGATTCGTCGTGGTTATCAAGTTTATACACAAGTTTATGCTTCCTGTCATTCTATGTCTTTGATATCATACCGTGATTTGGTTAGTGTTGCTTACACAGAAGGGGAAGTAAAGGCCATGGCTGCTGAGATTGAGGTGGAAGATGGCCCTAATGATGAGGGTGAGATGTTCACACGTCCCGGTAAACTCAGTGATCGATTTCCTCAGCCATATGCAAATGAATCGGCTGCTAGGTTTGCTAATGGAGGAGCCTATCCTCCAGATCGAAGTCTTGTTACCAAAGCTCGTTACAATGGTCAGAACTATGTGTTTTCTCTTCTTACCGGTTATCGTGACCCCCTTACTGGTGTTGTGATTAGAGAAGGACTACACTATAAACCTCACCAATCGAGCTTCTTCCGATTCCTCCATTCGCACACCACCTCTTCAAGAAACTATGGCCGCCATTTCGACAATAAAACCGTGATTCCCTTCACGAACCAAATCCAACAACATCAATGGCTCAATCATCACCATACAATAACAATCCTAACTCACAACAATGTTATCAACGCAAAGCAACTTTGA | 837 | 0.4265 | MDGGVIQQLLRSKLQYHSPNPLFVSSIITKKDGVGSTSSRSLKALALIGDGVSGLLGFVTTESVDEAEHGLASPSDLWPHDGILSSYDCASIRRGYQVYTQVYASCHSMSLISYRDLVSVAYTEGEVKAMAAEIEVEDGPNDEGEMFTRPGKLSDRFPQPYANESAARFANGGAYPPDRSLVTKARYNGQNYVFSLLTGYRDPLTGVVIREGLHYKPHQSSFFRFLHSHTTSSRNYGRHFDNKTVIPFTNQIQQHQWLNHHHTITILTHNNVINAKQL* | 279 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa5g4779 | 278 | Pfam | Cytochrome C1 family | 78 | 218 | IPR002326 | GO:0009055|GO:0020037 | |
Psa5g4779 | 278 | PANTHER | CYTOCHROME C1 | 27 | 218 | IPR002326 | GO:0009055|GO:0020037 | |
Psa5g4779 | 278 | Gene3D | - | 67 | 262 | IPR036909 | GO:0009055|GO:0020037 | |
Psa5g4779 | 278 | PRINTS | Cytochrome C1 signature | 76 | 95 | IPR002326 | GO:0009055|GO:0020037 | |
Psa5g4779 | 278 | PRINTS | Cytochrome C1 signature | 96 | 115 | IPR002326 | GO:0009055|GO:0020037 | |
Psa5g4779 | 278 | PRINTS | Cytochrome C1 signature | 141 | 161 | IPR002326 | GO:0009055|GO:0020037 | |
Psa5g4779 | 278 | PRINTS | Cytochrome C1 signature | 174 | 198 | IPR002326 | GO:0009055|GO:0020037 | |
Psa5g4779 | 278 | PANTHER | CYTOCHROME C1-1, HEME PROTEIN, MITOCHONDRIAL | 27 | 218 | - | - | |
Psa5g4779 | 278 | SUPERFAMILY | Cytochrome c | 72 | 217 | IPR036909 | GO:0009055|GO:0020037 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa5g4779 | Psa-Chr5 | 425583495 | 425584331 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa5g4779 | 3 | 218 | Chloroplast and Mitochondria Gene Families | AT3G27240 | 74.074 | 6.03e-100 | 293 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa5g4779 | K00413 | - | gmx:100803087 | 348.591 |