Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4779 ATGGATGGAGGTGTTATTCAACAGTTATTGAGGAGTAAACTCCAATATCATTCTCCTAATCCTTTGTTTGTGTCATCCATTATCACAAAGAAAGATGGTGTTGGTTCTACAAGCAGCAGATCCTTAAAAGCCCTTGCATTAATTGGAGATGGTGTGTCAGGGTTATTAGGTTTTGTAACAACAGAATCAGTTGATGAAGCAGAGCATGGTCTGGCTTCTCCAAGTGATCTATGGCCTCACGATGGCATCCTCAGTTCATATGACTGTGCTTCGATTCGTCGTGGTTATCAAGTTTATACACAAGTTTATGCTTCCTGTCATTCTATGTCTTTGATATCATACCGTGATTTGGTTAGTGTTGCTTACACAGAAGGGGAAGTAAAGGCCATGGCTGCTGAGATTGAGGTGGAAGATGGCCCTAATGATGAGGGTGAGATGTTCACACGTCCCGGTAAACTCAGTGATCGATTTCCTCAGCCATATGCAAATGAATCGGCTGCTAGGTTTGCTAATGGAGGAGCCTATCCTCCAGATCGAAGTCTTGTTACCAAAGCTCGTTACAATGGTCAGAACTATGTGTTTTCTCTTCTTACCGGTTATCGTGACCCCCTTACTGGTGTTGTGATTAGAGAAGGACTACACTATAAACCTCACCAATCGAGCTTCTTCCGATTCCTCCATTCGCACACCACCTCTTCAAGAAACTATGGCCGCCATTTCGACAATAAAACCGTGATTCCCTTCACGAACCAAATCCAACAACATCAATGGCTCAATCATCACCATACAATAACAATCCTAACTCACAACAATGTTATCAACGCAAAGCAACTTTGA 837 0.4265 MDGGVIQQLLRSKLQYHSPNPLFVSSIITKKDGVGSTSSRSLKALALIGDGVSGLLGFVTTESVDEAEHGLASPSDLWPHDGILSSYDCASIRRGYQVYTQVYASCHSMSLISYRDLVSVAYTEGEVKAMAAEIEVEDGPNDEGEMFTRPGKLSDRFPQPYANESAARFANGGAYPPDRSLVTKARYNGQNYVFSLLTGYRDPLTGVVIREGLHYKPHQSSFFRFLHSHTTSSRNYGRHFDNKTVIPFTNQIQQHQWLNHHHTITILTHNNVINAKQL* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4779 278 Pfam Cytochrome C1 family 78 218 IPR002326 GO:0009055|GO:0020037
Psa5g4779 278 PANTHER CYTOCHROME C1 27 218 IPR002326 GO:0009055|GO:0020037
Psa5g4779 278 Gene3D - 67 262 IPR036909 GO:0009055|GO:0020037
Psa5g4779 278 PRINTS Cytochrome C1 signature 76 95 IPR002326 GO:0009055|GO:0020037
Psa5g4779 278 PRINTS Cytochrome C1 signature 96 115 IPR002326 GO:0009055|GO:0020037
Psa5g4779 278 PRINTS Cytochrome C1 signature 141 161 IPR002326 GO:0009055|GO:0020037
Psa5g4779 278 PRINTS Cytochrome C1 signature 174 198 IPR002326 GO:0009055|GO:0020037
Psa5g4779 278 PANTHER CYTOCHROME C1-1, HEME PROTEIN, MITOCHONDRIAL 27 218 - -
Psa5g4779 278 SUPERFAMILY Cytochrome c 72 217 IPR036909 GO:0009055|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4779 Psa-Chr5 425583495 425584331 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4779 3 218 Chloroplast and Mitochondria Gene Families AT3G27240 74.074 6.03e-100 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4779 K00413 - gmx:100803087 348.591