Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4778 ATGCCGGCATGTCAAGCTACAATGACTGATTTGTCTACCATTGCAACAACTGCTTCCCCTATATTTGTTGCAGCTCCTGCTGAGAAAGGAAACTTTCCTGTTGATTTTCTCATGGGAGGAGTTTCGGCTGCTGTATCAAAAACTGATGCTGCTCCCATTAAGCGAATTAAGCTTTTGATCCAGAACCAAGATGAGATGATTAAAGCTGGTAGACTTTTTGAACCCTATAAGGGAATTGGTGACTGTTTTAAGAGAACAATTGCTGATGAAGGTATTGTTTCACTATGGAGAGGTAACACTGCAAACGTCATCCGTTATTCCCCACCCAGGCTTTGA 336 0.4226 MPACQATMTDLSTIATTASPIFVAAPAEKGNFPVDFLMGGVSAAVSKTDAAPIKRIKLLIQNQDEMIKAGRLFEPYKGIGDCFKRTIADEGIVSLWRGNTANVIRYSPPRL* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4778 111 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 2 108 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Psa5g4778 111 Pfam Mitochondrial carrier protein 31 108 IPR018108 -
Psa5g4778 111 Gene3D Mitochondrial carrier domain 26 110 IPR023395 -
Psa5g4778 111 PRINTS Mitochondrial carrier protein signature 35 48 IPR002067 GO:0055085
Psa5g4778 111 PRINTS Mitochondrial carrier protein signature 48 62 IPR002067 GO:0055085
Psa5g4778 111 PRINTS Mitochondrial carrier protein signature 98 111 IPR002067 GO:0055085
Psa5g4778 111 PRINTS Adenine nucleotide translocator signature 32 44 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Psa5g4778 111 PRINTS Adenine nucleotide translocator signature 76 97 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Psa5g4778 111 SUPERFAMILY Mitochondrial carrier 31 108 IPR023395 -
Psa5g4778 111 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 2 108 - -
Psa5g4778 111 ProSiteProfiles Solute carrier (Solcar) repeat profile. 30 111 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4778 Psa-Chr5 425470434 425471026 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4778 3 110 Antiporters AT5G13490 73.636 2.34e-51 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4778 K05863 - gmx:100819556 184.496