Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4711 ATGGAAAACGACAATGTCGTTTTTAGAAACGGAAATCCAGTTCTCGTCGCTCAGCCACTCACCGTTGTCCGCGCCCTAACCAGCAATGGCGGCGCTCGTGTTCTTGCCACGCCGCCTACTCTGAACCCTAACTCCGACGAGTTCGAAGCATGCAAAACCCCGATGATCAAGGTGAACGACGAGCCTCAAGAAGAAGATGTCAAACCTTCCGTGGAGCGGCGTTCAATGCTCCCGTTTGACGATTTTCTAAAGGCTACGAACACACAAGTTGTCACTGTTGACGAATCGATGAAATCAATGGAAGTTGAATCAACGATTCCAAAGAATACGGAGAGTGCCGATGTTGATGTGGTTTATGAGACTCAGGAATCGGTTAAGACTGGATTCGTAGATGAATCGCTGAAGTCAACGGAAGTTGAACTACCTATTCAAACTGAGGAAGAAGCTGTCAATGTCAATGTGATTTGTGAAACACAGGAATCCATCATCGCTGATCCGATTAATGAAGCAACGCGGATTCAATCAAATGAAGAAGCTTCCAAGGAGAAGGAAGTAGATATTAATGATTTGGAGGTGTTGAAGGTAGTGAAAGGGAAAGAAGCCGCTGTTAATGACGAAGTTAGTGTTTTGAAGGTGGTGAAGAAAGATGCAGTGGAAGAGAAGAAGATTCCGAATCTTGAGGATGGTGAGTTTCCTGTTGAGCCTGGGTGGTCATTACTCGGAAGGAAGATTGAGGTTGCTACTTCCACAGCTAGAGGACTAAGGAGATTGGTGGATAATGAGATTGTTTATTTCAATTTCCCTGACCCAAATACCTCTTACAAGTTCCAATGGATTGTTCGCGTCTCAACCAAACGTTCTGGAGTGGTTGGGAGGCTGCCAATGGAATGGGCAAAATCTGTCATGCCTCTTGTGCAATCTGGAAATGTTAGGGTTCAAGGCCGATGCATTGCCACACCATATAAATTGGAAATGATGCAAGAAATAATGTTGTTAGTGAGTTTTTATGTTCATCAATCTGTATTCTTGGAGTCTGTTGATACCTCTTGGAGGCTAGAGGCTTGTGGCCACATTAACTCTGCTGCTTACCCCCTCCTTACACTGTTAAACATGCTAGAGATTGAGCCATATAGGAAGGCTGATTTCATCCCTGAGGAAATGAAGGCTTGGAAGCGGATTCTTAAACTTGATTCAGATGAAGCTTCAGTTTTGCCTGTTAATAAGCGAAGAAAAGGCATCAGTGAGCCACTTCCTGAGCCAAATAAGAATGAACAAGCTCTTTCAGAGTCGGCTTTGAATAAACTTGTTGGAGCTGCTGAAGTCTTTGACTTAGAGTGCAGAGGGAGCCGTGGGGTCCGGGTGGGGGCGGGCGGTTCAATGCTCCGCGTTTGTGACGGATTTTCAGAAGCTGACGGAGGACACACAAGGTGTGGGTCACTGTTGACGGGAATCTATGGAAATGCAATGGGAAGTTTGAGATGCAGTACGGAGTTCCAAAGAAGTACAGATGCCTATGTTGATTGTGTTTATGAGGACTCAGAAGCTGCATTCAGAGATGAGAAGCTTCAGTGTTTGCCTGGGAATAAGGCGAAAAGAGGGAGGAGTGGGCGGATCCAGGAGGCGCGACTTTCCTGA 1635 0.4587 MENDNVVFRNGNPVLVAQPLTVVRALTSNGGARVLATPPTLNPNSDEFEACKTPMIKVNDEPQEEDVKPSVERRSMLPFDDFLKATNTQVVTVDESMKSMEVESTIPKNTESADVDVVYETQESVKTGFVDESLKSTEVELPIQTEEEAVNVNVICETQESIIADPINEATRIQSNEEASKEKEVDINDLEVLKVVKGKEAAVNDEVSVLKVVKKDAVEEKKIPNLEDGEFPVEPGWSLLGRKIEVATSTARGLRRLVDNEIVYFNFPDPNTSYKFQWIVRVSTKRSGVVGRLPMEWAKSVMPLVQSGNVRVQGRCIATPYKLEMMQEIMLLVSFYVHQSVFLESVDTSWRLEACGHINSAAYPLLTLLNMLEIEPYRKADFIPEEMKAWKRILKLDSDEASVLPVNKRRKGISEPLPEPNKNEQALSESALNKLVGAAEVFDLECRGSRGVRVGAGGSMLRVCDGFSEADGGHTRCGSLLTGIYGNAMGSLRCSTEFQRSTDAYVDCVYEDSEAAFRDEKLQCLPGNKAKRGRSGRIQEARLS* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4711 544 SMART HIRAN_2 240 337 IPR014905 GO:0003676|GO:0008270|GO:0016818
Psa5g4711 544 Pfam HIRAN domain 252 331 IPR014905 GO:0003676|GO:0008270|GO:0016818
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4711 213 445 RAD5 or RAD16-like Gene Family AT5G43530 47.881 1.67e-60 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4711 K15505 - gmx:100806677 365.155