Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4691 ATGGCTCAAAGAACAGAAAATGAAGAAACTGAATTCAAAGTACCTGAAACGATATCGCTTTGCATCAACAACTGTGGCGTAATCGGTAATCCTTCAACGAACAATATGTGTCAAAATTGCTTCACCGCTTCAACCGTAACCACTTCTTCCACCGTCGGGATCGGAATAACCGGAACCGGAATCGCACCTCAATCTTCCAGATCTGTTCGATCTCCGAAGAGATCTCTACCGGAGGAATCGTCTTCGGTTGTTACAGATCGGACTTCGTCGGATCAACCGATGGTTTCCGAGGCCAAGCGTGTTGTTAGCCGATGCTCCGGTTGCCGGAGGAAGGTAGGGTTGACCGGATTCCGATGTAGATGCGGTGATCTTTTCTGCTCCGAACATCGTTACTCCGATCGTCATGATTGTAGCTATGATTATAAAGGTGCTGGAAGAGAAGCTATTGCGAGGGAGAATCCGGTTATCAGAGCAGCGAAAATCGTTAAGGTTTGA 495 0.4727 MAQRTENEETEFKVPETISLCINNCGVIGNPSTNNMCQNCFTASTVTTSSTVGIGITGTGIAPQSSRSVRSPKRSLPEESSSVVTDRTSSDQPMVSEAKRVVSRCSGCRRKVGLTGFRCRCGDLFCSEHRYSDRHDCSYDYKGAGREAIARENPVIRAAKIVKV* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4691 164 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 20 50 - -
Psa5g4691 164 Gene3D - 1 80 - -
Psa5g4691 164 ProSiteProfiles Zinc finger AN1-type profile. 99 145 IPR000058 GO:0008270
Psa5g4691 164 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 164 - -
Psa5g4691 164 Gene3D - 81 160 IPR035896 -
Psa5g4691 164 SMART A20_3 18 42 IPR002653 GO:0003677|GO:0008270
Psa5g4691 164 Pfam AN1-like Zinc finger 105 142 IPR000058 GO:0008270
Psa5g4691 164 ProSiteProfiles Zinc finger A20-type profile. 15 49 IPR002653 GO:0003677|GO:0008270
Psa5g4691 164 MobiDBLite consensus disorder prediction 58 92 - -
Psa5g4691 164 Pfam A20-like zinc finger 19 41 IPR002653 GO:0003677|GO:0008270
Psa5g4691 164 SUPERFAMILY AN1-like Zinc finger 90 158 IPR035896 -
Psa5g4691 164 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 5 1 164 - -
Psa5g4691 164 SMART AN1_Zf_4 105 142 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4691 Psa-Chr5 416463943 416465521 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4691 8 164 C2H2 Transcription Factor Family AT3G52800 36.782 2.77e-33 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4691 - - var:108333085 236.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g4691 5 416463943 416465521 Psa5g4691 5 416463943 416465521 ECH