Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4690 ATGTTCTTTGGTATCTCTTGGATGAAAAATTTGACAGTAACAAATGTGGTAGGTTTCAACTCTCAGTCGTCCTACGGTATGCAATCCATGCTCAAAGAATGTCACAAGCATCTCTCCGGTCTCAACGAAGCCGTTCTCAAAAACACCGATGCTTGTAACCAACTCTTCACCATCACTCGCACTTCCCTCGGTCCCAACGGGATGAATGAGATGGTTACAAATCATTTGGATAAACTTCTTATGAAGAATGATGCTGCTACGATTGTGAATGAACTTGAAGTTCAACATCCTGCTACTAAGATTTTGGTGTTGGCTAGTAAGGCTCAGCAAGAGGAAATCGGTGATGGTGCAAATTTGACTATTTCTTTTGCCGGCGAGTTGCTTCATGGTGCCGAGGAGCTTATTAGGATGGGTTTGCATCCTAGAAGACCTCAGGGAGATTCTTTTGAACCATTGACTGTCAAGCAGGGGAAGAAGCACATTAGCACACCCGTTCCTCATGATTCATACTCGGTTCTTCCTGTAAGCATTTCAGGAAAGTATTTAGCAATCGTATGGCCAAATATTCCTTGTTTCTCTGTCTACAAGGTCAATGATTGGTCAATTGTTGACTCTGGCAGTGCAAGGCTTCTCGCTTGGGATGCTTGTTGTGACAGATTTGCTATATTGGAATCATCATTACCTCCCCGAATTCCTATAATTCCCAAGGGTAGTTCATCAAAAAGAGCAAAAGAAGTTGTCGCAGCTGCTGCTGGTTCCTCAGCTTCTGTTCAAGTGCGAACCGTGTTGGATGATGGAACATCAAATATACTAATGAGATCTGTTGGTGCACCCAATGAACCAGTCATTGGTTTGCATGGAGGGGCACTGCTTGGTGTTGCCTATCGGACATCTAGAAGAACCAGTCCAGGTGAGCGTAAAACAGGCACCGTTGGCAAACCATTACTTGGCACCGTTGGCAAACCATTACTTGGTATGCAGGTCAAGATTCTTGCAGATGAGGAGCATGAGAGTGAGGAATCAGGGATTGGCGAGCTTTGCGTTAAAAGCCCTTCATTGTTTACAAAATATTATAAACTTCCTGAGGATGATCCAAGGAATCCAGTTGTTATTACTGATAATGTTGGTGATATTGCTGGTATGGGATTCGATCTATTTGGTGCGTATGCAGAGGCATCTTGTAGGCTTATCATTGGATTTGTCACTGAATACTATACCGGCGATGCATACAGCCCTGTGCAAGATGTTGTTGATTCCTGCAGGACTGGTGTTGCTACCAATGTTATCTTTGTTTTGATGCCATGTATGGTGTTGTTGTTTGCTACACTTGGAATGTTGAATACTATAGCAACCGGAGTAGCCATCGATGCATACGGTCCAATTAGTGACAATGCCGGAGTTGTTGCCGAGATGGCTGGAATGAGTCACAAAATTCGTGAGAGAACCGATGCTCTTGATGTTGTAGGAAACACAACTGCTGCCATTGGAAAGGGGTTTGCTATTGGTTATGCCGCCCTTGTGTCTTTGGCTCTTTTTGGTGCCTTTGTGAGCCATGCTGGTATTACAACAATTGATGTCCTGACTCCCAAGGTTTTCATCGGTCTGATTGTGGGTGCCATGCTCTCTTACTGGTTTTCTGACCTGACCATGAAGAGTGTTGGAAGCGCAGCATTGAAGATGGTTGAGAAAGTTTGCAGGCAATTCAACACGATTCCCGGATTGATGGAGGGAACTGCGAAACCTGACTATGCCACATGTGCTACAATCACCACCTCAGATCCAAGTCATGGCTCTTGTCTATATCTTGGAAGTTTTGGCAACAAAAATAGCACCTTTGGCAACTTCACAGCACCATTAATGAATTCAAATTCCGATTCTTCAGCCTACAACATCCACAGCCGCAAATTGAGAATTAAAAGCCTTCTAATGGTGACAGGATTTCTAATACTGGGAGTGGTTTTGCTGTAG 1968 0.4405 MFFGISWMKNLTVTNVVGFNSQSSYGMQSMLKECHKHLSGLNEAVLKNTDACNQLFTITRTSLGPNGMNEMVTNHLDKLLMKNDAATIVNELEVQHPATKILVLASKAQQEEIGDGANLTISFAGELLHGAEELIRMGLHPRRPQGDSFEPLTVKQGKKHISTPVPHDSYSVLPVSISGKYLAIVWPNIPCFSVYKVNDWSIVDSGSARLLAWDACCDRFAILESSLPPRIPIIPKGSSSKRAKEVVAAAAGSSASVQVRTVLDDGTSNILMRSVGAPNEPVIGLHGGALLGVAYRTSRRTSPGERKTGTVGKPLLGTVGKPLLGMQVKILADEEHESEESGIGELCVKSPSLFTKYYKLPEDDPRNPVVITDNVGDIAGMGFDLFGAYAEASCRLIIGFVTEYYTGDAYSPVQDVVDSCRTGVATNVIFVLMPCMVLLFATLGMLNTIATGVAIDAYGPISDNAGVVAEMAGMSHKIRERTDALDVVGNTTAAIGKGFAIGYAALVSLALFGAFVSHAGITTIDVLTPKVFIGLIVGAMLSYWFSDLTMKSVGSAALKMVEKVCRQFNTIPGLMEGTAKPDYATCATITTSDPSHGSCLYLGSFGNKNSTFGNFTAPLMNSNSDSSAYNIHSRKLRIKSLLMVTGFLILGVVLL* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4690 655 Pfam TCP-1/cpn60 chaperonin family 57 142 IPR002423 GO:0005524
Psa5g4690 655 Gene3D - 21 144 IPR027413 -
Psa5g4690 655 Gene3D - 269 377 IPR042099 -
Psa5g4690 655 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 396 432 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa5g4690 655 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 359 395 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa5g4690 655 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 440 592 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa5g4690 655 SUPERFAMILY GroEL equatorial domain-like 36 143 IPR027413 -
Psa5g4690 655 PANTHER PYROPHOSPHATE-ENERGISED PROTON PUMP, PYRIDOXAL PHOSPHATE-DEPENDENT TRANSFERASE-RELATED 396 432 - -
Psa5g4690 655 PANTHER PYROPHOSPHATE-ENERGISED PROTON PUMP, PYRIDOXAL PHOSPHATE-DEPENDENT TRANSFERASE-RELATED 359 395 - -
Psa5g4690 655 PANTHER PYROPHOSPHATE-ENERGISED PROTON PUMP, PYRIDOXAL PHOSPHATE-DEPENDENT TRANSFERASE-RELATED 440 592 - -
Psa5g4690 655 Pfam AMP-binding enzyme 314 362 IPR000873 -
Psa5g4690 655 PRINTS Tailless complex polypeptide 1 (chaperone) signature 57 73 IPR017998 GO:0140662
Psa5g4690 655 PRINTS Tailless complex polypeptide 1 (chaperone) signature 79 97 IPR017998 GO:0140662
Psa5g4690 655 PRINTS Tailless complex polypeptide 1 (chaperone) signature 109 128 IPR017998 GO:0140662
Psa5g4690 655 PRINTS Tailless complex polypeptide 1 (chaperone) signature 395 417 IPR017998 GO:0140662
Psa5g4690 655 Pfam Inorganic H+ pyrophosphatase 440 593 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa5g4690 655 Pfam Inorganic H+ pyrophosphatase 359 395 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa5g4690 655 SUPERFAMILY Acetyl-CoA synthetase-like 314 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4690 Psa-Chr5 416369770 416373468 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4690 396 585 Primary Pumps ATPases AT1G15690 74.299 2.79e-94 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4690 K23025 - pop:18111071 310.071