Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4680 ATGTCCACCACAACCTCACACTTCACATTGAATGTTCTTGAGCATTGCAAAATCACACCTCCACTCAATACAACTCCAACAACATTTTCCCTCCCACTAACATTCTTTGACATTCCTTGGCTTCTCTTTTCTCCAAGCCAACCTCTATTTTTCTATGAATTTCCTCACTCAATTTCACATTTCACAACCACCATTGTCCCAAAACTTAAACAATCTCTTTCTCTTACGCTTCAACATTACTTCCCATTTTCCGGTATATTCGCTCCCTCGTCCAGTCTAACCGAACCCCGACTCATATTCACTAATAACAACTCCATTTTGTTCGTGGTCGCTGAATCAAACAGCGACTTCAAACACTTGTGCTCTTATCATGCAAGAGATGTCAACAACTTCCACCCATTAGTCCCAAAATTGCCACAAATATTTTCATTTGAACTCAAAGAATTCCCTTTGTTAACTATTCAAATTACATCATTCCCAAATTATGGCTTTTCCATTGGCCTAGCTTTTCATCACGTTGTTGCCGATGGAAGAACCTTCCACAATTTCATCAAAACATGGTCTTCATATTGTTCTTCTATTTCTTCTACCTTTGAAACCTCACCATCAATAAAGCCCTTACCCTTTTACGACCGAGACGTGATCATCGACGAAAAAGACCTTCACGAAATTTTCTTAAAAGATTTAAGAAAAAGAAATGTCATAGATAACAAAGAAACAAAAGTGGATATCTCAAACATGACTAGAGCTACATTCTCAATGAGTCCAAATAAAATGGAGAAAGTAAAAAAATTTATTCTTGAATCATGCAAGGAAAAGAAAACATCACTTCCTTTGCATTTATCTCCTTATGTGTTAACTAGTGCTTTTTTTTGGGTTTGTTTGGTTAAAACCCAACAAGAGTTTGTTAATGAAGATGTTACACACTTTGGATTCATTGCTGGTGGAATAACAAGGTTAGAGTATGAAGTACCAAAGAACTATTTTGGTAATTGTGTTGGATTTGGAAAGGTATCATTGAGAAGAAAGGACTTACTAGGAGAAGATGGAATTGTTATTGCATCTAAAGAAATTGGAAGCACAATAAAGAAACTTGATGCATCAATTTTAGGGGAAGGTGAAAAGTGGATTTTGGATTGGGAAATGTTACATGGGTCAGAGGAACATGTTCATGTGACATGGTCCCCAAAATTGAAACTTTATGAATTGAATTTTGGGTGGGGGAAGCCTAAGAAAATTGAAGAGATTTCAATTGATTTTACAAGAGGTGTTTCTTTTGTTGAGAGTAGAGATTTTGAGGGTGGGATTGAAATAGGGTTAGCTTTGCCTAAGTGTGAAATGGATGTTTTCACTTTTTTGTTTAATAAAGGACTTGAGGATCTACCATGA 1389 0.3621 MSTTTSHFTLNVLEHCKITPPLNTTPTTFSLPLTFFDIPWLLFSPSQPLFFYEFPHSISHFTTTIVPKLKQSLSLTLQHYFPFSGIFAPSSSLTEPRLIFTNNNSILFVVAESNSDFKHLCSYHARDVNNFHPLVPKLPQIFSFELKEFPLLTIQITSFPNYGFSIGLAFHHVVADGRTFHNFIKTWSSYCSSISSTFETSPSIKPLPFYDRDVIIDEKDLHEIFLKDLRKRNVIDNKETKVDISNMTRATFSMSPNKMEKVKKFILESCKEKKTSLPLHLSPYVLTSAFFWVCLVKTQQEFVNEDVTHFGFIAGGITRLEYEVPKNYFGNCVGFGKVSLRRKDLLGEDGIVIASKEIGSTIKKLDASILGEGEKWILDWEMLHGSEEHVHVTWSPKLKLYELNFGWGKPKKIEEISIDFTRGVSFVESRDFEGGIEIGLALPKCEMDVFTFLFNKGLEDLP* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4680 462 Pfam Transferase family 17 451 - -
Psa5g4680 462 PANTHER - 6 460 - -
Psa5g4680 462 Gene3D - 244 461 IPR023213 -
Psa5g4680 462 Gene3D - 10 242 IPR023213 -
Psa5g4680 462 PANTHER MALONYL-COENZYME A:ANTHOCYANIN 3-O-GLUCOSIDE-6''-O-MALONYLTRANSFERASE-LIKE 6 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4680 Psa-Chr5 415953752 415955325 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4680 49 454 Monolignol Biosynthesis Gene Families AT5G48930 24.466 3.13e-20 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4680 - - gmx:100817166 565.459